favicon #186

	name: genieclust for Python

	on:
	push:
	branches: [ master ]
	pull_request:
	branches: [ master ]

	jobs:
	build:
	runs-on: ubuntu-latest
	strategy:
	matrix:
	python-version: ['3.7', '3.8', '3.9', '3.10', '3.11', '3.12']

	env:
	R_LIBS_SITE: /usr/lib/R/site-library

	steps:
	- uses: actions/checkout@v4
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v4
	with:
	python-version: ${{ matrix.python-version }}
	- name: Install dependencies
	run: \|
	sudo apt-get update
	sudo apt-get -y upgrade
	sudo apt-get -y install libcurl4-openssl-dev python3-rpy2 libmlpack-dev r-base-dev python3-dev pandoc
	sudo mkdir -p /usr/lib/R/site-library
	sudo Rscript -e "install.packages(c('genie', 'Rcpp', 'tinytest', 'roxygen2', 'pkgbuild'))"
	#sudo Rscript -e "devtools::install_github('gagolews/Rd2rst')"
	sudo make r
	sudo python3 -m pip install --upgrade pip
	if [ -f requirements.txt ]; then sudo pip3 install -r requirements.txt --upgrade; fi
	sudo pip3 install wheel flake8 pytest --upgrade
	sudo pip3 install sphinx numpydoc sphinx_rtd_theme sphinx-bootstrap-theme sphinxcontrib-jsmath sphinxcontrib-bibtex myst_parser --upgrade
	sudo pip3 install rpy2 pweave ipython jupyter tabulate --upgrade
	- name: Install optional dependencies (nmslib)
	continue-on-error: true
	run: \|
	sudo pip3 install nmslib --upgrade
	- name: Install optional dependencies (mlpack)
	continue-on-error: true
	run: \|
	sudo pip3 install mlpack --upgrade
	- name: Test and check Python
	run: \|
	sudo make py-test
	sudo make py-check

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