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rmarkdown instead of knitr #131

rmarkdown instead of knitr

rmarkdown instead of knitr #131

Triggered via push July 26, 2024 15:20
Status Failure
Total duration 19m 23s
Artifacts 4

check-bioc.yml

on: push
Matrix: build-check
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7 errors and 11 warnings
ubuntu-latest (4.3)
Process completed with exit code 1.
ubuntu-latest (next)
Process completed with exit code 1.
macOS-latest (4.3)
No such keg: /opt/homebrew/Cellar/r
macOS-latest (4.3)
R CMD check found WARNINGs
macOS-latest (4.3)
Process completed with exit code 1.
windows-latest (4.3)
R CMD check found WARNINGs
windows-latest (4.3)
Process completed with exit code 1.
ubuntu-latest (4.3)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, actions/cache@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ubuntu-latest (next)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, actions/cache@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
macOS-latest (4.3)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, actions/cache@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
macOS-latest (4.3)
harfbuzz 9.0.0 is already installed and up-to-date. To reinstall 9.0.0, run: brew reinstall harfbuzz
macOS-latest (4.3)
macOS's Gatekeeper has been disabled for this Cask
macOS-latest (4.3)
macOS's Gatekeeper has been disabled for this Cask
macOS-latest (4.3)
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
macOS-latest (4.3)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
macOS-latest (4.3)
Files in the 'vignettes' directory but no files in 'inst/doc':
windows-latest (4.3)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, actions/cache@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
windows-latest (4.3)
Files in the 'vignettes' directory but no files in 'inst/doc':

Artifacts

Produced during runtime
Name Size
Linux-biocversion-3.18-r-4.3-results Expired
6.67 MB
Linux-biocversion-3.19-r-next-results Expired
6.69 MB
Windows-biocversion-3.18-r-4.3-results Expired
4.6 MB
macOS-biocversion-3.18-r-4.3-results Expired
4.53 MB