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Make minor fixes in export tests #313

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Make minor fixes in export tests

Make minor fixes in export tests #313

Workflow file for this run

.github/workflows/ci.yml at 744dbbf
name: ci
on:
push:
branches: [main]
pull_request:
branches: [main]
workflow_dispatch:
jobs:
#
# Build and test Fortuno in various system configurations
#
build-and-test:
runs-on: ${{ matrix.os }}
env:
BUILD_DIR: _build
INSTALL_DIR: _install
FPM_EXPORT_DIR: _fpm_export
strategy:
fail-fast: false
matrix:
include:
- os: ubuntu-24.04
compiler: gnu
mpi: nompi
interface: serial
- os: ubuntu-24.04
compiler: gnu
mpi: mpich
interface: mpi
- os: ubuntu-24.04
compiler: gnu
mpi: openmpi
interface: mpi
- os: ubuntu-24.04
compiler: intel
mpi: nompi
interface: serial
- os: ubuntu-24.04
compiler: intel
mpi: impi
interface: mpi
- os: ubuntu-24.04
compiler: intel
mpi: nompi
interface: coarray
- os: macos-latest
compiler: gnu
mpi: nompi
interface: serial
# MPICH on MacOS seems to lack mpi_f08 interface
# - os: macos-latest
# compiler: gnu
# mpi: mpich
# interface: mpi
- os: macos-latest
compiler: gnu
mpi: openmpi
interface: mpi
steps:
- name: Check-out code
uses: actions/checkout@v4
- name: Setup Intel compiler
if: ${{ contains(matrix.compiler, 'intel') }}
uses: rscohn2/setup-oneapi@v0
with:
# Restricting to 2024 as fpm fails to build MPI-programs with oneAPI 2025.0
components: |
ifx@2024.2.1
icx@2024.2.1
impi@2021.13.1
- name: Setup Intel environment
if: ${{ contains(matrix.compiler, 'intel') }}
run: |
source /opt/intel/oneapi/setvars.sh
printenv >> ${GITHUB_ENV}
echo "CMAKE_FC=ifx" >> ${GITHUB_ENV}
echo "MESON_FC=ifx" >> ${GITHUB_ENV}
echo "FPM_FC=ifx" >> ${GITHUB_ENV}
# Overriding default FPM_FFLAGS as default setting contains '-standard-semantics'
# which is incompatible with intel MPI.
echo "FPM_FFLAGS='-warn all -check all,nouninit -error-limit 1 -O0 -g -stand f18 -traceback'" >> ${GITHUB_ENV}
- name: Setup GNU compiler
if: ${{ contains(matrix.compiler, 'gnu') }}
uses: fortran-lang/setup-fortran@v1
with:
compiler: gcc
version: 13
- name: Setup GNU environment
if: ${{ contains(matrix.compiler, 'gnu') }}
run: |
echo "CMAKE_FC=${{ env.FC }}" >> ${GITHUB_ENV}
echo "MESON_FC=${{ env.FC }}" >> ${GITHUB_ENV}
if [[ ${{ matrix.interface }} == serial ]] && [[ ${{ matrix.os }} == ubuntu-* ]]; then
echo "CMAKE_FFLAGS=-Og -fsanitize=address" >> ${GITHUB_ENV}
echo "CMAKE_LDFLAGS=-fsanitize=address" >> ${GITHUB_ENV}
echo "MESON_FFLAGS=-fsanitize=address -ffree-line-length-none" >> ${GITHUB_ENV}
echo "MESON_LDLAGS=-fsanitize=address" >> ${GITHUB_ENV}
else
echo "MESON_FFLAGS=-ffree-line-length-none" >> ${GITHUB_ENV}
fi
echo "FPM_FC=${{ env.FC }}" >> ${GITHUB_ENV}
echo "FPM_FFLAGS=-ffree-line-length-none" >> ${GITHUB_ENV}
- name: Setup MPICH on Ubuntu
if: ${{ contains(matrix.os, 'ubuntu') && contains(matrix.mpi, 'mpich') }}
run: |
sudo apt-get update
sudo apt-get install -y mpich
- name: Setup OpenMPI on Ubuntu
if: ${{ contains(matrix.os, 'ubuntu') && contains(matrix.mpi, 'openmpi') }}
run: |
sudo apt-get update
sudo apt-get install -y openmpi-common openmpi-bin libopenmpi-dev
echo "CMAKE_FC=mpifort" >> ${GITHUB_ENV}
echo "MPI_RUN_OPTIONS=--oversubscribe" >> ${GITHUB_ENV}
- name: Setup MPICH on MacOS
if: ${{ contains(matrix.os, 'macos') && contains(matrix.mpi, 'mpich') }}
run: |
brew install mpich
- name: Setup OpenMPI on MacOS
if: ${{ contains(matrix.os, 'macos') && contains(matrix.mpi, 'openmpi') }}
run: |
brew install openmpi
echo "MPI_RUN_OPTIONS=--oversubscribe" >> ${GITHUB_ENV}
- name: Setup serial interface options
if: ${{ contains(matrix.interface, 'serial') }}
run: |
echo "CMAKE_OPTIONS=-DFORTUNO_WITH_SERIAL=ON" >> ${GITHUB_ENV}
echo "MESON_OPTIONS_NOFALLBACK=" >> ${GITHUB_ENV}
echo "MESON_OPTIONS_FALLBACK=-Dfortuno:with_serial=true" >> ${GITHUB_ENV}
echo "INTERFACE=serial" >> ${GITHUB_ENV}
echo "RUN_PREFIX=" >> ${GITHUB_ENV}
- name: Setup mpi interface options
if: ${{ contains(matrix.interface, 'mpi') }}
run: |
echo "CMAKE_OPTIONS=-DFORTUNO_WITH_MPI=ON" >> ${GITHUB_ENV}
echo "MESON_OPTIONS_NOFALLBACK=" >> ${GITHUB_ENV}
echo "MESON_OPTIONS_FALLBACK=-Dfortuno:with_mpi=true" >> ${GITHUB_ENV}
echo "INTERFACE=mpi" >> ${GITHUB_ENV}
echo "RUN_PREFIX=mpirun -n 2 ${MPI_RUN_OPTIONS}" >> ${GITHUB_ENV}
- name: Setup coarray interface options
if: ${{ contains(matrix.interface, 'coarray') }}
run: |
echo "CMAKE_OPTIONS=-DFORTUNO_WITH_COARRAY=ON -DFORTUNO_FFLAGS_COARRAY='-coarray' -DFORTUNO_LDFLAGS_COARRAY='-coarray'" >> ${GITHUB_ENV}
echo "MESON_OPTIONS_NOFALLBACK=-Dfflags_coarray=-coarray -Dldflags_coarray=-coarray" >> ${GITHUB_ENV}
echo "MESON_OPTIONS_FALLBACK=-Dfflags_coarray=-coarray -Dldflags_coarray=-coarray -Dfortuno:with_coarray=true -Dfortuno:fflags_coarray=-coarray -Dfortuno:ldflags_coarray=-coarray" >> ${GITHUB_ENV}
echo "FPM_FFLAGS=${FPM_FFLAGS} -coarray" >> ${GITHUB_ENV}
echo "FPM_LDFLAGS=${FPM_LDFLAGS} -coarray" >> ${GITHUB_ENV}
echo "INTERFACE=coarray" >> ${GITHUB_ENV}
echo "RUN_PREFIX=" >> ${GITHUB_ENV}
- name: Setup build tools
run: |
pip install cmake fpm meson ninja fypp
- name: Build Fortuno
run: |
FC=${CMAKE_FC} FFLAGS=${CMAKE_FFLAGS} cmake ${CMAKE_OPTIONS} -DCMAKE_INSTALL_PREFIX=${INSTALL_DIR} -B ${BUILD_DIR} -G Ninja
cmake --build ${BUILD_DIR} --verbose
cmake --install ${BUILD_DIR} --verbose
ctest --test-dir ${BUILD_DIR} --verbose
rm -rf ${BUILD_DIR}
- name: Test CMake export
run: |
CMAKE_PREFIX_PATH=${INSTALL_DIR} FC=${CMAKE_FC} FFLAGS=${CMAKE_FFLAGS} cmake -B ${BUILD_DIR} -G Ninja test/export/${INTERFACE}
cmake --build ${BUILD_DIR}
${RUN_PREFIX} ${BUILD_DIR}/app/testapp
${RUN_PREFIX} ${BUILD_DIR}/app/testapp_fpp
${RUN_PREFIX} ${BUILD_DIR}/app/testapp_fypp
rm -rf ${BUILD_DIR}
- name: Test fpm export
run: |
./devel/fpm-repo/export-fpm-repo.sh ${INTERFACE} ${FPM_EXPORT_DIR}
FPM_FC=${FPM_FC} FPM_FFLAGS=${FPM_FFLAGS} fpm run -C ${FPM_EXPORT_DIR}/test/export/${INTERFACE} --runner "${RUN_PREFIX}" testapp testapp_fpp
rm -rf ${FPM_EXPORT_DIR}
- name: Test Meson pkgconfig export
# Meson only detects OpenMPI reliably (as of version 1.5.2)
if: ${{ !contains(matrix.interface, 'mpi') || contains(matrix.mpi, 'openmpi') }}
run: |
export PKG_CONFIG_PATH="${PWD}/${INSTALL_DIR}/lib/pkgconfig:${PKG_CONFIG_PATH}"
cd test/export/${INTERFACE}
FC=${MESON_FC} FFLAGS=${MESON_FFLAGS} meson setup ${MESON_OPTIONS_NOFALLBACK} --wrap-mode nofallback ${BUILD_DIR}
ninja -j1 -v -C ${BUILD_DIR}
${RUN_PREFIX} ${BUILD_DIR}/testapp
${RUN_PREFIX} ${BUILD_DIR}/testapp_fpp
rm -rf ./${BUILD_DIR}
- name: Test Meson subproject export
# Meson only detects OpenMPI reliably (as of version 1.5.2)
if: ${{ !contains(matrix.interface, 'mpi') || contains(matrix.mpi, 'openmpi') }}
run: |
FORTUNO_DIR=${PWD}
GIT_REV=$(git rev-parse HEAD)
cd test/export/${INTERFACE}
mkdir subprojects
echo -e "[wrap-git]\ndirectory=fortuno\n" > subprojects/fortuno.wrap
echo -e "url=file://${FORTUNO_DIR}\nrevision=${GIT_REV}\n" >> subprojects/fortuno.wrap
FC=${MESON_FC} FFLAGS=${MESON_FFLAGS} meson setup ${MESON_OPTIONS_FALLBACK} --wrap-mode forcefallback ${BUILD_DIR}
ninja -j1 -v -C ${BUILD_DIR}
${RUN_PREFIX} ${BUILD_DIR}/testapp
${RUN_PREFIX} ${BUILD_DIR}/testapp_fpp
rm -rf subprojects ${BUILD_DIR}
deploy-fpm-repos:
needs: build-and-test
if: github.repository == 'fortuno-repos/fortuno' && github.event_name == 'push' && github.ref == 'refs/heads/main'
runs-on: ubuntu-24.04
env:
DEPLOYMENT_KEY_PREFIX: DEPLOY_KEY
DEPLOYMENT_TARGET_REPO_PREFIX: fortuno-fpm
steps:
- name: Check-out code
uses: actions/checkout@v4
- name: Export serial repository content
run: ./devel/fpm-repo/export-fpm-repo.sh serial _fpm_serial
- name: Push to serial repository
uses: cpina/github-action-push-to-another-repository@main
env:
SSH_DEPLOY_KEY: ${{ secrets[format('{0}_FORTUNO_FPM_SERIAL', env.DEPLOYMENT_KEY_PREFIX)] }}
with:
source-directory: _fpm_serial
destination-github-username: fortuno-repos
destination-repository-name: ${{ format('{0}-serial', env.DEPLOYMENT_TARGET_REPO_PREFIX) }}
user-email: aradi@uni-bremen.de
target-branch: main
- name: Export mpi repository content
run: ./devel/fpm-repo/export-fpm-repo.sh mpi _fpm_mpi
- name: Push to mpi repository
uses: cpina/github-action-push-to-another-repository@main
env:
SSH_DEPLOY_KEY: ${{ secrets[format('{0}_FORTUNO_FPM_MPI', env.DEPLOYMENT_KEY_PREFIX)] }}
with:
source-directory: _fpm_mpi
destination-github-username: fortuno-repos
destination-repository-name: ${{ format('{0}-mpi', env.DEPLOYMENT_TARGET_REPO_PREFIX) }}
user-email: aradi@uni-bremen.de
target-branch: main
- name: Export coarray repository content
run: ./devel/fpm-repo/export-fpm-repo.sh coarray _fpm_coarray
- name: Push to coarray repository
uses: cpina/github-action-push-to-another-repository@main
env:
SSH_DEPLOY_KEY: ${{ secrets[format('{0}_FORTUNO_FPM_COARRAY', env.DEPLOYMENT_KEY_PREFIX)] }}
with:
source-directory: _fpm_coarray
destination-github-username: fortuno-repos
destination-repository-name: ${{ format('{0}-coarray', env.DEPLOYMENT_TARGET_REPO_PREFIX) }}
user-email: aradi@uni-bremen.de
target-branch: main