Equivalent of CaImAn-MATLAB field "Df"? #1291
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mitlabence
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Egads I would recommend you just start using Caiman, which has been steadily being updated with debugging etc over the years and offers support etc, rather than rewrite your old Matlab code in Python (Caiman is basically that Caiman-Matlab rewritten in Python, incidentally 😄 ). But if you insist: You will find the |
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Hey everyone,
I am in the process of porting ancient Matlab code that uses CaImAn-MATLAB to python. In this code, I came across the field/attribute
Df
being used to normalizeC
(temporal components) for each detected cell (I believe this is equivalent to theC_df
field in the old CaImAn). I thoughtF_dff
is the modern alternative to this normalization, but it seems like the latter uses the deconvolved signal, while the formerC/Df
uses the temporal component. Did I miss something? Is there an alternative toDf
that I can use to normalize the temporal components?Thank you for your help!
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