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  1. amiga amiga Public

    Analysis of Microbial Growth Assays

    Python 12 3

  2. cdiff-biolog-growth cdiff-biolog-growth Public

    Code for analyzing data in the C. difficile Biolog manuscript by Midani et al.

    Python 1

  3. bayesian-gmm bayesian-gmm Public

    Repo for Bayesian Guassian Mixture Models customized for analysis of flow-cytometry data

    Python

  4. FlowCytometryWrangling FlowCytometryWrangling Public

    Repo for wrangling and analyzing flow cytometry data

    Python

  5. BacteroidesFlowCytometry BacteroidesFlowCytometry Public

    Library for the analysis of flow cytometry samples of multi-strain fluorescent microbial populations.

    Jupyter Notebook

  6. LAD-LAB/Midani_Cholera_JID_2018 LAD-LAB/Midani_Cholera_JID_2018 Public

    Repo of data and code for Midani et al paper in Journal of Infectious Diseases

    Jupyter Notebook