Skip to content

clean bibtex file #31

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
wants to merge 2 commits into
base: main
Choose a base branch
from
+2 −49
Open

clean bibtex file #31

Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
7193b0b
add code to remove empty entries in bibtex file
thomas-saigre May 23, 2025
f7d5123
revert modification of DEFAULT_ZOTERO_GROUP_ID
thomas-saigre May 23, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
51 changes: 2 additions & 49 deletions a.cli
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -132,55 +132,6 @@ delete_release() {
echo "Release $VERSION deleted successfully."
}

# Function to fetch and update BibTeX file from Zotero
update_bibtex() {
if [ -z "$ZOTERO_GROUP_ID" ]; then
if [ -z "$ZOTERO_USER_ID" ]; then
echo "Zotero group ID and user ID are not set, one of them is required."
echo "If Group ID is set, User ID is not required."
exit 1
fi
fi

if [ -z "$ZOTERO_API_KEY" ]; then
echo "Zotero API key is not set."
exit 1
fi

echo "Fetching BibTeX entries from Zotero..."

# Define the URL to fetch BibTeX
if [ -z "$ZOTERO_GROUP_ID" ]; then
URL="https://api.zotero.org/users/$ZOTERO_USER_ID/items?format=biblatex"
else
URL="https://api.zotero.org/groups/$ZOTERO_GROUP_ID/items?format=biblatex"
fi
start=0
limit=100
has_more=true
echo "" > "$BIBTEX_FILE"
while $has_more; do
response=$(curl -s -H "Zotero-API-Key: $ZOTERO_API_KEY" "$URL&start=$start&limit=$limit")

if [ -z "$response" ]; then
echo "No more items to fetch."
has_more=false
break
fi

echo "$response" >> "$BIBTEX_FILE"

# Check if we need to fetch more items
num_items=$(echo "$response" | grep -c "@") # Counting the number of BibTeX entries
if [ "$num_items" -lt "$limit" ]; then
has_more=false
else
start=$((start + limit))
fi
done

echo "BibTeX entries updated successfully in $BIBTEX_FILE."
}

update_bibtex2() {
if [ -z "$ZOTERO_GROUP_ID" ]; then
Expand Down Expand Up @@ -242,6 +193,8 @@ update_bibtex2() {
echo "start=$start, has_more=$has_more"
done

# Remove unwanted BibTeX entries matching the pattern
python3 -c "import os, re; fname = '$BIBTEX_FILE'; content = open(fname).read(); new_content = re.sub(r'@misc\{noauthor_notitle_nodate(-*\d*),\s*\}\n+', '', content); open(fname, 'w').write(new_content)"
echo "BibTeX entries updated successfully in $BIBTEX_FILE."
}

Expand Down