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Add DEqMS support in fdge for proteomics differential abundance analysis #47

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lianos opened this issue Sep 14, 2021 · 0 comments
Open

Add DEqMS support in fdge for proteomics differential abundance analysis #47

lianos opened this issue Sep 14, 2021 · 0 comments
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enhancement New feature or request

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lianos commented Sep 14, 2021

DEqMS is developped on top of Limma. However, Limma assumes same prior variance for all genes. In proteomics, the accuracy of protein abundance estimates varies by the number of peptides/PSMs quantified in both label-free and labelled data
@lianos lianos self-assigned this Sep 14, 2021
@lianos lianos added the enhancement New feature or request label Sep 14, 2021
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