pflotran-ogs-docker

Docker image for PFLOTRAN-OGS v1.6 https://docs.opengosim.com/

Tags

The image is tagged with:

• "latest"
• PFLOTRAN-OGS version in the form of 1.6_sv9
• Short SHA of the last commit of PFLOTRAN-OGS

Tested to run on:

• Ubuntu 20.04 (Native and WSL 2) on x86-64
• Ubuntu 22.04 (Native and WSL 2) on x86-64
• Debian 11.3 (Native and chromeOS crostini) on x86-64

To run

This image runs as root in order to have permission to the host volume

CLI

docker run -v <YOUR_HOST_WORK_DIR>:/app/work gchr.io/equinor/pflotran-ogs-docker:latest <INPUT_FILE_NAME> <N_THREAD>

Interactive

docker run -it -v <YOUR_HOST_WORK_DIR>:/app/work --entrypoint=/bin/bash gchr.io/equinor/pflotran-ogs-docker:latest

Once inside the interactive terminal of the container you can then run either:

• pft <INPUT_FILE_NAME> <N_THREAD>
• $MPI_PATH -n <N_THREAD> $PFT_PATH -pflotranin <INPUT_FILE_NAME>

Environmental variables

PETSC_DIR Path to PETSc

MPI_PATH Path to mpiexec

PFT_PATH Path to compiled pflotran binary

You may also want to set TZ