#4884 – Implement basic preview display for monomer bonds

packages/ketcher-core/src/application/editor/tools/SelectRectangle.ts

@@ -27,6 +27,7 @@ import { Nucleotide } from 'domain/entities/Nucleotide';
 import { SequenceMode } from '../modes';
 import { isMacOs } from 'react-device-detect';
 import { EraserTool } from './Erase';
+import { PolymerBondRenderer } from 'application/render';
 
 class SelectRectangle implements BaseTool {
   private brush;
@@ -269,6 +270,31 @@ class SelectRectangle implements BaseTool {
     this.editor.renderersContainer.update(modelChanges);
   }
 
+  public mouseOverPolymerBond(event) {
+    const renderer: PolymerBondRenderer = event.target.__data__;
+
+    const modelChanges =
+      this.editor.drawingEntitiesManager.showPolymerBondInformation(
+        renderer.polymerBond,
+      );
+    this.editor.renderersContainer.markForRecalculateBegin();
+    this.editor.renderersContainer.update(modelChanges);
+  }
+
+  public mouseLeavePolymerBond(event) {
+    const renderer: PolymerBondRenderer = event.target.__data__;
+    if (!renderer.polymerBond) {
+      return;
+    }
+
+    const modelChanges =
+      this.editor.drawingEntitiesManager.hidePolymerBondInformation(
+        renderer.polymerBond,
+      );
+    this.editor.renderersContainer.markForRecalculateBegin();
+    this.editor.renderersContainer.update(modelChanges);
+  }
+
   setSelectedEntities() {
     this.previousSelectedEntities =
       this.editor.drawingEntitiesManager.allEntities.filter(

packages/ketcher-core/src/application/formatters/types/ket.ts

@@ -102,7 +102,7 @@ export enum KetTemplateType {
 
 export interface IKetMonomerTemplate {
   type: KetTemplateType.MONOMER_TEMPLATE;
-  class?: monomerClass;
+  class?: KetMonomerClass;
   monomerSubClass?:
     | 'AminoAcid'
     | 'Sugar'

packages/ketcher-core/src/domain/entities/BaseMonomer.ts

@@ -1,6 +1,10 @@
 import { DrawingEntity, DrawingEntityConfig } from './DrawingEntity';
 import { Vec2 } from 'domain/entities/vec2';
-import { AttachmentPointName, MonomerItemType } from 'domain/types';
+import {
+  AttachmentPointName,
+  AttachmentPointsToBonds,
+  MonomerItemType,
+} from 'domain/types';
 import { PolymerBond } from 'domain/entities/PolymerBond';
 import { BaseMonomerRenderer } from 'application/render/renderers/BaseMonomerRenderer';
 import { BaseRenderer } from 'application/render/renderers/BaseRenderer';
@@ -22,17 +26,13 @@ export type BaseMonomerConfig = DrawingEntityConfig;
 
 export abstract class BaseMonomer extends DrawingEntity {
   public renderer?: BaseMonomerRenderer | BaseSequenceItemRenderer = undefined;
-  public attachmentPointsToBonds: Partial<
-    Record<AttachmentPointName, PolymerBond | null>
-  > = {};
+  public attachmentPointsToBonds: AttachmentPointsToBonds = {};
 
   public chosenFirstAttachmentPointForBond: AttachmentPointName | null;
   public potentialSecondAttachmentPointForBond: AttachmentPointName | null;
   public chosenSecondAttachmentPointForBond: AttachmentPointName | null;
 
-  public potentialAttachmentPointsToBonds: {
-    [key: string]: PolymerBond | null | undefined;
-  } = {};
+  public potentialAttachmentPointsToBonds: AttachmentPointsToBonds = {};
 
   public attachmentPointsVisible = false;
   public monomerItem: MonomerItemType;
@@ -318,9 +318,7 @@ export abstract class BaseMonomer extends DrawingEntity {
     return Boolean(this.getPotentialBondByAttachmentPoint(attachmentPointName));
   }
 
-  private getAttachmentPointDict(): Partial<
-    Record<AttachmentPointName, PolymerBond | null>
-  > {
+  private getAttachmentPointDict(): AttachmentPointsToBonds {
     if (this.monomerItem.attachmentPoints) {
       const { attachmentPointDictionary } =
         BaseMonomer.getAttachmentPointDictFromMonomerDefinition(
@@ -335,9 +333,7 @@ export abstract class BaseMonomer extends DrawingEntity {
   public static getAttachmentPointDictFromMonomerDefinition(
     attachmentPoints: IKetAttachmentPoint[],
   ): {
-    attachmentPointDictionary: Partial<
-      Record<AttachmentPointName, PolymerBond | null>
-    >;
+    attachmentPointDictionary: AttachmentPointsToBonds;
     attachmentPointsList: AttachmentPointName[];
   } {
     const attachmentPointDictionary = {};
@@ -440,9 +436,7 @@ export abstract class BaseMonomer extends DrawingEntity {
     return superatomWithoutLabel.getAttachmentPoints();
   }
 
-  public getAttachmentPointDictFromAtoms(): Partial<
-    Record<AttachmentPointName, PolymerBond | null>
-  > {
+  public getAttachmentPointDictFromAtoms(): AttachmentPointsToBonds {
     const attachmentPointNameToBond = {};
 
     this.superatomAttachmentPoints.forEach((superatomAttachmentPoint) => {

packages/ketcher-core/src/domain/types/monomers.ts

@@ -6,10 +6,12 @@ import {
   RNABase,
   Struct,
   Sugar,
+  PolymerBond,
 } from 'domain/entities';
 import {
   IKetAttachmentPoint,
   IKetIdtAliases,
+  KetMonomerClass,
 } from 'application/formatters/types/ket';
 import { D3SvgElementSelection } from 'application/render/types';
 
@@ -34,8 +36,7 @@ export type MonomerItemType = {
     MonomerCaps?: { [key: string]: string };
     MonomerCode?: string;
     MonomerType?: string;
-    // TODO: Specify the type. `readonly MonomerClass: KetMonomerClass`?
-    MonomerClass?: string;
+    MonomerClass?: KetMonomerClass;
     isMicromoleculeFragment?: boolean;
     idtAliases?: IKetIdtAliases;
     unresolved?: boolean;
@@ -82,3 +83,7 @@ export type AttachmentPointConstructorParams = {
 };
 
 export type ConcreteMonomer = Peptide | Sugar | RNABase | Phosphate | Chem;
+
+export type AttachmentPointsToBonds = Partial<
+  Record<AttachmentPointName, PolymerBond | null>
+>;

packages/ketcher-macromolecules/src/Editor.tsx

@@ -75,7 +75,7 @@ import { useContextMenu } from 'react-contexify';
 import { CONTEXT_MENU_ID } from 'components/contextMenu/types';
 import { SequenceItemContextMenu } from 'components/contextMenu/SequenceItemContextMenu/SequenceItemContextMenu';
 import { SequenceStartArrow } from 'components/shared/monomerOnCanvas/SequenceStartArrow';
-import { Preview } from 'components/shared/Preview';
+import { Preview } from 'components/preview/Preview';
 import { SequenceTypeDropdown } from 'components/SequenceTypeButton';
 import { TopMenuComponent } from 'components/TopMenuComponent';
 import { LeftMenuComponent } from 'components/LeftMenuComponent';

packages/ketcher-macromolecules/src/EditorEvents.tsx

@@ -15,7 +15,12 @@
  ***************************************************************************/
 import { useCallback, useEffect } from 'react';
 import {
+  BondPreviewState,
+  MonomerPreviewState,
   PresetPosition,
+  PresetPreviewState,
+  PreviewStyle,
+  PreviewType,
   selectEditor,
   selectEditorActiveTool,
   selectTool,
@@ -34,6 +39,7 @@ import {
   calculateNucleoElementPreviewTop,
 } from 'helpers';
 import { selectAllPresets } from 'state/rna-builder';
+import { PolymerBond } from 'ketcher-core/dist/domain/entities/PolymerBond';
 
 const noPreviewTools = ['bond-single'];
 
@@ -136,11 +142,44 @@ export const EditorEvents = () => {
     };
   }, [editor]);
 
+  const handleOpenBondPreview = useCallback(
+    (polymerBond: PolymerBond, style: PreviewStyle) => {
+      const previewData: BondPreviewState = {
+        type: PreviewType.Bond,
+        polymerBond,
+        style,
+      };
+
+      debouncedShowPreview(previewData);
+    },
+    [debouncedShowPreview],
+  );
+
   const handleOpenPreview = useCallback(
     (e) => {
+      const polymerBond = e.target.__data__?.polymerBond;
+      if (polymerBond) {
+        const polymerCoordinates = e.target.getBoundingClientRect();
+        const { width, height, top, left } = polymerCoordinates;
+        let style = { top: '', left: '' };
+        if (width > height) {
+          style = {
+            top: `${top + height + 10}px`,
+            left: `${left + width / 2}px`,
+          };
+        } else {
+          style = {
+            top: `${top + height / 2}px`,
+            left: `${left + width + 10}px`,
+          };
+        }
+        handleOpenBondPreview(polymerBond, style);
+        return;
+      }
+
+      // TODO: Split to separate functions for monomers and presets
       const cardCoordinates = e.target.getBoundingClientRect();
       const left = `${cardCoordinates.left + cardCoordinates.width / 2}px`;
-
       const sequenceNode = e.target.__data__?.node;
       const monomer = e.target.__data__?.monomer || sequenceNode?.monomer;
       const monomerItem = monomer.monomerItem;
@@ -180,34 +219,38 @@ export const EditorEvents = () => {
           position = PresetPosition.ChainMiddle;
         }
 
-        debouncedShowPreview({
-          preset: {
-            monomers,
-            name: existingPreset?.name,
-            idtAliases: existingPreset?.idtAliases,
-            position,
-          },
+        const presetPreviewData: PresetPreviewState = {
+          type: PreviewType.Preset,
+          monomers,
+          name: existingPreset?.name,
+          idtAliases: existingPreset?.idtAliases,
+          position,
           style: {
             left,
             top: monomerItem
               ? calculateNucleoElementPreviewTop(cardCoordinates)
               : '',
             transform: 'translate(-50%, 0)',
           },
-        });
+        };
+
+        debouncedShowPreview(presetPreviewData);
         return;
       }
 
-      debouncedShowPreview({
+      const monomerPreviewData: MonomerPreviewState = {
+        type: PreviewType.Monomer,
         monomer: monomerItem,
         attachmentPointsToBonds,
         style: {
           left,
           top: monomerItem ? calculateMonomerPreviewTop(cardCoordinates) : '',
         },
-      });
+      };
+
+      debouncedShowPreview(monomerPreviewData);
     },
-    [debouncedShowPreview, presets],
+    [handleOpenBondPreview, debouncedShowPreview, presets],
   );
 
   const handleClosePreview = useCallback(() => {
@@ -220,6 +263,8 @@ export const EditorEvents = () => {
     editor?.events.mouseLeaveMonomer.add(handleClosePreview);
     editor?.events.mouseOverSequenceItem.add(handleOpenPreview);
     editor?.events.mouseLeaveSequenceItem.add(handleClosePreview);
+    editor?.events.mouseOverPolymerBond.add(handleOpenPreview);
+    editor?.events.mouseLeavePolymerBond.add(handleClosePreview);
 
     const onMoveHandler = (e) => {
       handleClosePreview();
@@ -238,6 +283,8 @@ export const EditorEvents = () => {
       editor?.events.mouseOnMoveSequenceItem.remove(onMoveHandler);
       editor?.events.mouseOverSequenceItem.remove(handleOpenPreview);
       editor?.events.mouseLeaveSequenceItem.remove(handleClosePreview);
+      editor?.events.mouseOverPolymerBond.remove(handleOpenPreview);
+      editor?.events.mouseLeavePolymerBond.remove(handleClosePreview);
     };
   }, [editor, activeTool, handleOpenPreview, handleClosePreview]);