Merge pull request #37 from emo-bon/fix-bugs

This PR adds returns an eggnog summary. 
It addresses issues #31, #35  and #36

Merge pull request #30 from emo-bon/fix-dbs-path

This PR fixes issue #29.

Merge pull request #39 from EBI-Metagenomics/build_gff_fgs

supporting FGS protein predictions in GFF building

Merge pull request #28 from EBI-Metagenomics/fix_seqprep

Fix seqprep

add filtering by length before SeqPrep

add cond to suppress wf and remove empty.sh

AntiSmash to gff - refactor.

Removed the dependency of the json file.

hotfix for antismash

biom-convert wrapper

fix return rna-count assembly