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Workflow file for this run

name: Build and Deploy on release
on:
release:
types: [published]
workflow_dispatch:
inputs:
upload_anaconda:
description: 'Upload build to anaconda'
required: false
default: 'skip'
type: choice
options:
- 'pre-release'
- 'main'
- 'skip'
upload_pypi:
description: 'Upload build to pypi'
required: false
default: false
type: boolean
deploy_docs:
description: 'Deploy docs to github pages'
required: false
default: false
type: boolean
env:
PACKAGE_NAME: pymer4
DEPLOY_PY_VER: 3.8 # only this job runner deploys docs and pypi package
DEPLOY_OS: ubuntu-latest
CONDA_BLD_PATH: /tmp/ci_conda_bld
defaults:
run:
# login shell to source the conda hook in .bash_profile
shell:
bash -l {0}
jobs:
ci:
runs-on: ${{ matrix.os }}
continue-on-error: ${{ matrix.experimental }}
strategy:
fail-fast: true
matrix:
py_ver: [3.8, 3.9, '3.10', 3.11]
os: [ubuntu-latest, macos-latest]
experimental: [true]
outputs:
# tarballs are py3X job-specific
conda-tarball: ${{ steps.conda-bld.outputs.conda-tarball }}
steps:
# ------------------------------------------------------------
# 0. Print some basic github action info
- name: diagnostic info
run: |
echo "OS: ${{ matrix.os }}"
echo "Python: ${{ matrix.py_ver }}"
echo "Conda build path: $CONDA_BLD_PATH"
echo "Deploy OS: $DEPLOY_OS"
echo "Deploy Python: $DEPLOY_PY_VER"
echo "GA event name: ${{ github.event_name }}"
echo "GA ref: ${{ github.ref }}"
# ------------------------------------------------------------
# Step up miniconda
- name: Download Miniconda
uses: conda-incubator/setup-miniconda@059455a698430d8b68fa317268fa2e3da3492a98
with:
miniconda-version: "latest"
python-version: ${{ matrix.py_ver }}
# ------------------------------------------------------------
# Get code
- name: Checkout code
uses: actions/checkout@v2
# ------------------------------------------------------------
# Setup conda build environment and build package
# env defined here are just for convenience when writing bash commands
- name: Setup and build package
env:
OS: ${{ runner.os }}
PY_VER: ${{ matrix.py_ver }}
run: |
conda config --set always_yes yes --set changeps1 no
conda config --set bld_path $CONDA_BLD_PATH
conda install -n base -q conda-build
conda deactivate
echo "# ----------------BUILDING---------------------------------"
conda config --show | grep bld_path
conda info
conda-build ./conda/ --python=$PY_VER -c https://conda.anaconda.org/conda-forge/ --verify
tarball=$(conda build --python=$PY_VER conda --output | tail -1)
if [[ $OS == "Linux" ]]; then \
conda convert -p win-64 -o $CONDA_BLD_PATH $tarball; \
fi
echo "conda build tarball" $tarball
echo "{conda-tarball}={$tarball}" >> $GITHUB_OUTPUT
# ------------------------------------------------------------
# Create new conda env and install package locally
# Test installation worked
# Get black and pytest from pip because black version on conda lags behind
- name: Test installation
env:
PY_VER: ${{ matrix.py_ver }}
run: |
conda create -n env_$PY_VER python=$PY_VER $PACKAGE_NAME -c $CONDA_BLD_PATH -c conda-forge -c defaults
conda activate env_$PY_VER
conda info | grep active
pip install -r requirements-dev.txt
python -c "from pymer4.test_install import test_install; test_install()"
# 4. Run code tests
- name: Run Test Suite
env:
PY_VER: ${{ matrix.py_ver }}
run: |
conda activate env_$PY_VER
conda info | grep active
black --version
black --check --verbose .
pytest pymer4/tests
# 5a. Build docs (only for 3.8 which handles deployment)
# Will also run on PRs which serves as another layer of testing
- name: Build docs
env:
PY_VER: ${{ matrix.py_ver }}
if: ${{ matrix.py_ver == env.DEPLOY_PY_VER && matrix.os == env.DEPLOY_OS }}
run: |
conda activate env_$PY_VER
conda info | grep active
conda install sphinx sphinx_bootstrap_theme sphinx-gallery -c conda-forge
cd docs && make clean && make html
touch _build/html/.nojekyll
# 5b. Deploy docs
# Only runs on the 3.8 runner when there's a release
- name: Deploy docs
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
if: ${{ (matrix.py_ver == env.DEPLOY_PY_VER && matrix.os == env.DEPLOY_OS) && (github.event_name == 'release' || inputs.deploy_docs)}}
uses: crazy-max/ghaction-github-pages@v2
with:
target_branch: gh-pages
build_dir: docs/_build/html
# 6. Build package for PyPi
# Only runs on the 3.8 runner
- name: Build for Pypi
env:
PY_VER: ${{ matrix.py_ver }}
if: ${{ matrix.py_ver == env.DEPLOY_PY_VER && matrix.os == env.DEPLOY_OS }}
run: |
conda activate env_$PY_VER
conda info | grep active
pip install build
python -m build --sdist --wheel --outdir dist/
# 7. Deploy package to Pypi
# Only runs on the 3.8 runner when there's a release
- name: PyPi deploy
if: ${{ (matrix.py_ver == env.DEPLOY_PY_VER && matrix.os == env.DEPLOY_OS) && (github.event_name == 'release' || inputs.upload_pypi)}}
uses: pypa/gh-action-pypi-publish@master
with:
password: ${{ secrets.PYPI_API_TOKEN }}
# 8a. Deploy package to main conda main channel
# Runs when a github release is created, but can also be triggered manually
- name: Conda main deploy
if: ${{ (github.event_name == 'release') || (inputs.upload_anaconda == 'main') }}
env:
ANACONDA_TOKEN: ${{ secrets.ANACONDA_TOKEN }}
run: |
echo 'Conda release on main channel'
conda install anaconda-client
anaconda -t "$ANACONDA_TOKEN" upload $CONDA_BLD_PATH/**/${PACKAGE_NAME}*.tar.bz2 -l "main"
# OR -----
# 8b. Deploy package to pre-release conda channel
# Only runs when triggered manually
- name: Conda pre-release deploy
if: ${{ inputs.upload_anaconda == 'pre-release' }}
env:
ANACONDA_TOKEN: ${{ secrets.ANACONDA_TOKEN }}
run: |
echo 'Conda release on pre-release channel'
conda install anaconda-client
anaconda -t "$ANACONDA_TOKEN" upload $CONDA_BLD_PATH/**/${PACKAGE_NAME}*.tar.bz2 -l "pre-release"