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Unable to install#26
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@aasdelat

Description

@aasdelat
aasdelat
opened on Apr 7, 2024

What happened?

Trying to install following the instructions. I have DimensionalData and AxisArrays alredy installed on my system.
julia> VERSION
v"1.10.2"

What are the steps to reproduce the bug?

I type:
(CfGRIB) pkg> activate .
(CfGRIB) pkg> instantiate
Then backslash and:
using CfGRIB
and get
Precompiling CfGRIB
Info Given CfGRIB was explicitly requested, output will be shown live
ERROR: LoadError: UndefVarError: _extrema_dims not defined
and a long Stacktrace.

Version

0.1.0

Platform (OS and architecture)

Linux ryzen-casa 6.5.0-25-generic #25~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Tue Feb 20 16:09:15 UTC 2 x86_64 x86_64 x86_64 GNU/Linux

Relevant log output

(@v1.10) pkg> activate .
  Activating project at `~/Documentos/codigo/cfgrib.jl`

(CfGRIB) pkg> instantiate

julia> using CfGRIB
Precompiling CfGRIB
        Info Given CfGRIB was explicitly requested, output will be shown live 
ERROR: LoadError: UndefVarError: `_extrema_dims` not defined
Stacktrace:
 [1] getproperty(x::Module, f::Symbol)
   @ Base ./Base.jl:31
 [2] top-level scope
   @ ~/.julia/packages/DimensionalData/Z5pRw/src/methods.jl:59
 [3] include(mod::Module, _path::String)
   @ Base ./Base.jl:495
 [4] include(x::String)
   @ DimensionalData ~/.julia/packages/DimensionalData/Z5pRw/src/DimensionalData.jl:1
 [5] top-level scope
   @ ~/.julia/packages/DimensionalData/Z5pRw/src/DimensionalData.jl:58
 [6] include
   @ ./Base.jl:495 [inlined]
 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
   @ Base ./loading.jl:2222
 [8] top-level scope
   @ stdin:3
in expression starting at /home/antonio/.julia/packages/DimensionalData/Z5pRw/src/methods.jl:59
in expression starting at /home/antonio/.julia/packages/DimensionalData/Z5pRw/src/DimensionalData.jl:1
in expression starting at stdin:3
ERROR: LoadError: Failed to precompile DimensionalData [0703355e-b756-11e9-17c0-8b28908087d0] to "/home/antonio/.julia/compiled/v1.10/DimensionalData/jl_Nppgv0".Data
Stacktrace:
 [1] top-level scope
   @ ~/Documentos/codigo/cfgrib.jl/src/backends.jl:46
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:495
 [3] include(x::String)
   @ CfGRIB ~/Documentos/codigo/cfgrib.jl/src/CfGRIB.jl:4
 [4] top-level scope
   @ ~/Documentos/codigo/cfgrib.jl/src/CfGRIB.jl:43
 [5] include
   @ ./Base.jl:495 [inlined]
 [6] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
   @ Base ./loading.jl:2222
 [7] top-level scope
   @ stdin:3
in expression starting at /home/antonio/Documentos/codigo/cfgrib.jl/src/backends.jl:39
in expression starting at /home/antonio/Documentos/codigo/cfgrib.jl/src/CfGRIB.jl:1
in expression starting at stdin:3

caused by: Failed to precompile DimensionalData [0703355e-b756-11e9-17c0-8b28908087d0] to "/home/antonio/.julia/compiled/v1.10/DimensionalData/jl_Nppgv0".
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:35
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
    @ Base ./loading.jl:2468
  [3] compilecache
    @ ./loading.jl:2340 [inlined]
  [4] (::Base.var"#968#969"{Base.PkgId})()
    @ Base ./loading.jl:1974
  [5] mkpidlock(f::Base.var"#968#969"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile ~/.julia/juliaup/julia-1.10.2+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93
  [6] #mkpidlock#6
    @ ~/.julia/juliaup/julia-1.10.2+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined]
  [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile ~/.julia/juliaup/julia-1.10.2+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111
  [8] #invokelatest#2
    @ ./essentials.jl:894 [inlined]
  [9] invokelatest
    @ ./essentials.jl:889 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#968#969"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:2983
 [11] maybe_cachefile_lock
    @ ./loading.jl:2980 [inlined]
 [12] _require(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:1970
 [13] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1812
 [14] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [15] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [16] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1803
 [17] macro expansion
    @ ./loading.jl:1790 [inlined]
 [18] macro expansion
    @ ./lock.jl:267 [inlined]
 [19] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1753
 [20] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [21] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [22] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1746
 [23] top-level scope
    @ ~/Documentos/codigo/cfgrib.jl/src/backends.jl:40
 [24] include(mod::Module, _path::String)
    @ Base ./Base.jl:495
 [25] include(x::String)
    @ CfGRIB ~/Documentos/codigo/cfgrib.jl/src/CfGRIB.jl:4
 [26] top-level scope
    @ ~/Documentos/codigo/cfgrib.jl/src/CfGRIB.jl:43
 [27] include
    @ ./Base.jl:495 [inlined]
 [28] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:2222
 [29] top-level scope
    @ stdin:3
  ✗ DimensionalData
  ✗ CfGRIB
  0 dependencies successfully precompiled in 3 seconds. 38 already precompiled.

ERROR: The following 2 direct dependencies failed to precompile:

CfGRIB [b476ad61-2aff-463c-b862-1d4433a0d503]

Failed to precompile CfGRIB [b476ad61-2aff-463c-b862-1d4433a0d503] to "/home/antonio/.julia/compiled/v1.10/CfGRIB/jl_iMRNEH".
ERROR: LoadError: UndefVarError: `_extrema_dims` not defined
Stacktrace:
 [1] getproperty(x::Module, f::Symbol)
   @ Base ./Base.jl:31
 [2] top-level scope
   @ ~/.julia/packages/DimensionalData/Z5pRw/src/methods.jl:59
 [3] include(mod::Module, _path::String)
   @ Base ./Base.jl:495
 [4] include(x::String)
   @ DimensionalData ~/.julia/packages/DimensionalData/Z5pRw/src/DimensionalData.jl:1
 [5] top-level scope
   @ ~/.julia/packages/DimensionalData/Z5pRw/src/DimensionalData.jl:58
 [6] include
   @ ./Base.jl:495 [inlined]
 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
   @ Base ./loading.jl:2222
 [8] top-level scope
   @ stdin:3
in expression starting at /home/antonio/.julia/packages/DimensionalData/Z5pRw/src/methods.jl:59
in expression starting at /home/antonio/.julia/packages/DimensionalData/Z5pRw/src/DimensionalData.jl:1
in expression starting at stdin:3
ERROR: LoadError: Failed to precompile DimensionalData [0703355e-b756-11e9-17c0-8b28908087d0] to "/home/antonio/.julia/compiled/v1.10/DimensionalData/jl_Nppgv0".
Stacktrace:
 [1] top-level scope
   @ ~/Documentos/codigo/cfgrib.jl/src/backends.jl:46
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:495
 [3] include(x::String)
   @ CfGRIB ~/Documentos/codigo/cfgrib.jl/src/CfGRIB.jl:4
 [4] top-level scope
   @ ~/Documentos/codigo/cfgrib.jl/src/CfGRIB.jl:43
 [5] include
   @ ./Base.jl:495 [inlined]
 [6] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
   @ Base ./loading.jl:2222
 [7] top-level scope
   @ stdin:3
in expression starting at /home/antonio/Documentos/codigo/cfgrib.jl/src/backends.jl:39
in expression starting at /home/antonio/Documentos/codigo/cfgrib.jl/src/CfGRIB.jl:1
in expression starting at stdin:3

caused by: Failed to precompile DimensionalData [0703355e-b756-11e9-17c0-8b28908087d0] to "/home/antonio/.julia/compiled/v1.10/DimensionalData/jl_Nppgv0".
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:35
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
    @ Base ./loading.jl:2468
  [3] compilecache
    @ ./loading.jl:2340 [inlined]
  [4] (::Base.var"#968#969"{Base.PkgId})()
    @ Base ./loading.jl:1974
  [5] mkpidlock(f::Base.var"#968#969"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile ~/.julia/juliaup/julia-1.10.2+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93
  [6] #mkpidlock#6
    @ ~/.julia/juliaup/julia-1.10.2+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined]
  [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile ~/.julia/juliaup/julia-1.10.2+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111
  [8] #invokelatest#2
    @ ./essentials.jl:894 [inlined]
  [9] invokelatest
    @ ./essentials.jl:889 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#968#969"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:2983
 [11] maybe_cachefile_lock
    @ ./loading.jl:2980 [inlined]
 [12] _require(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:1970
 [13] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1812
 [14] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [15] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [16] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1803
 [17] macro expansion
    @ ./loading.jl:1790 [inlined]
 [18] macro expansion
    @ ./lock.jl:267 [inlined]
 [19] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1753
 [20] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [21] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [22] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1746
 [23] top-level scope
    @ ~/Documentos/codigo/cfgrib.jl/src/backends.jl:40
 [24] include(mod::Module, _path::String)
    @ Base ./Base.jl:495
 [25] include(x::String)
    @ CfGRIB ~/Documentos/codigo/cfgrib.jl/src/CfGRIB.jl:4
 [26] top-level scope
    @ ~/Documentos/codigo/cfgrib.jl/src/CfGRIB.jl:43
 [27] include
    @ ./Base.jl:495 [inlined]
 [28] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:2222
 [29] top-level scope
    @ stdin:3
DimensionalData [0703355e-b756-11e9-17c0-8b28908087d0]

Failed to precompile DimensionalData [0703355e-b756-11e9-17c0-8b28908087d0] to "/home/antonio/.julia/compiled/v1.10/DimensionalData/jl_Thk7Y6".
ERROR: LoadError: UndefVarError: `_extrema_dims` not defined
Stacktrace:
 [1] getproperty(x::Module, f::Symbol)
   @ Base ./Base.jl:31
 [2] top-level scope
   @ ~/.julia/packages/DimensionalData/Z5pRw/src/methods.jl:59
 [3] include(mod::Module, _path::String)
   @ Base ./Base.jl:495
 [4] include(x::String)
   @ DimensionalData ~/.julia/packages/DimensionalData/Z5pRw/src/DimensionalData.jl:1
 [5] top-level scope
   @ ~/.julia/packages/DimensionalData/Z5pRw/src/DimensionalData.jl:58
 [6] include
   @ ./Base.jl:495 [inlined]
 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
   @ Base ./loading.jl:2222
 [8] top-level scope
   @ stdin:3
in expression starting at /home/antonio/.julia/packages/DimensionalData/Z5pRw/src/methods.jl:59
in expression starting at /home/antonio/.julia/packages/DimensionalData/Z5pRw/src/DimensionalData.jl:1
in expression starting at stdin:3
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types ~/.julia/juliaup/julia-1.10.2+0.x64.linux.gnu/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70
  [2] precompile(ctx::Pkg.Types.Context, pkgs::Vector{…}; internal_call::Bool, strict::Bool, warn_loaded::Bool, already_instantiated::Bool, timing::Bool, _from_loading::Bool, kwargs::@Kwargs{…})
    @ Pkg.API ~/.julia/juliaup/julia-1.10.2+0.x64.linux.gnu/share/julia/stdlib/v1.10/Pkg/src/API.jl:1659
  [3] precompile(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.TTY, kwargs::@Kwargs{_from_loading::Bool})
    @ Pkg.API ~/.julia/juliaup/julia-1.10.2+0.x64.linux.gnu/share/julia/stdlib/v1.10/Pkg/src/API.jl:159
  [4] precompile
    @ ~/.julia/juliaup/julia-1.10.2+0.x64.linux.gnu/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined]
  [5] #precompile#114
    @ ~/.julia/juliaup/julia-1.10.2+0.x64.linux.gnu/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined]
  [6] #invokelatest#2
    @ ./essentials.jl:894 [inlined]
  [7] invokelatest
    @ ./essentials.jl:889 [inlined]
  [8] _require(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:1963
  [9] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1812
 [10] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [11] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [12] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1803
 [13] macro expansion
    @ ./loading.jl:1790 [inlined]
 [14] macro expansion
    @ ./lock.jl:267 [inlined]
 [15] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1753
 [16] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [17] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [18] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1746
Some type information was truncated. Use `show(err)` to see complete types.

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