voxelflow

Workflow for stitching and registration

example

nextflow convert_imgs.nf --inputFolder /mnt/galaxybrain/compute/test-data -profile local -c process_settings.config

cd singularity/bigstitcher && make

Name		Name	Last commit message	Last commit date
Latest commit History 241 Commits
nextflow-dask		nextflow-dask
nextflow-spark		nextflow-spark
processes		processes
singularity		singularity
tests		tests
workflows		workflows
.gitignore		.gitignore
README.md		README.md
addRound.nf		addRound.nf
convertImgs.nf		convertImgs.nf
fiducialStitch.nf		fiducialStitch.nf
initOme.nf		initOme.nf
nextflow.config		nextflow.config
nf-test.config		nf-test.config
phaseCorrStitch.nf		phaseCorrStitch.nf
process_settings.config		process_settings.config
render.nf		render.nf
startDask.nf		startDask.nf