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  • A repository run by the US CDC to collect forecasts of weekly incident COVID-19 hospital admissions.

    R Apache License 2.0 Updated Jan 9, 2025
  • R MIT License Updated Jan 9, 2025
  • Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    Apache License 2.0 Updated Jan 5, 2025
  • R Apache License 2.0 Updated Nov 7, 2024
  • numpyro Public

    Forked from pyro-ppl/numpyro

    Probabilistic programming with NumPy powered by JAX for autograd and JIT compilation to GPU/TPU/CPU.

    Python Apache License 2.0 Updated Sep 28, 2024
  • stan-docs Public

    Forked from stan-dev/docs

    Documentation for the Stan language and CmdStan

    TeX Other Updated Sep 17, 2024
  • R Apache License 2.0 Updated Apr 18, 2024
  • grizzlyplot Public

    Python 4 Updated Apr 3, 2024
  • Code and data to accompany "Host and viral determinants of airborne transmission of SARS-CoV-2 in the Syrian hamster"

    Python BSD 3-Clause "New" or "Revised" License Updated Oct 2, 2023
  • Code and data to accompany the paper "Stability of Monkeypox Virus in Body Fluids and Wastewater"

    Python 1 BSD 3-Clause "New" or "Revised" License Updated Sep 28, 2023
  • Python Updated Sep 28, 2023
  • Python Updated Sep 28, 2023
  • pyter Public

    Bayesian quantitative virology using Numpyro

    Python 1 Updated Sep 27, 2023
  • Development of new personal website with quarto

    TeX Updated Apr 30, 2023
  • Comparative Aerosol and Surface Stability of SARS-CoV-2 Variants of Concern

    R BSD 3-Clause "New" or "Revised" License Updated Mar 15, 2023
  • Code and data for the manuscript "Optimal, near-optimal, and robust epidemic control"

    Python 11 4 BSD 3-Clause "New" or "Revised" License Updated Jul 23, 2022
  • Code and data for "Heat-treated virus inactivation rate depends strongly on treatment procedure" (Gamble, Fischer et al)

    R 1 Updated Jul 14, 2021
  • Code and data for study of SARS-CoV-2 environmental stability as a function of temperature and humidity

    R 5 Other Updated Apr 27, 2021
  • Code and data to accompany "Assessment of N95 respirator decontamination and re-use for SARS-CoV-2"

    R 2 Other Updated Mar 5, 2021
  • Code and data for "Asynchrony between virus diversity and antibody selection limits influenza virus evolution"

    C++ Other Updated Nov 20, 2020
  • Updated Jun 18, 2020
  • Code and data for "Wild hummingbirds discriminate nonspectral colors"

    R 2 BSD 3-Clause "New" or "Revised" License Updated Jun 15, 2020
  • Code and data to accompany the paper "Aerosol and Surface Stability of SARS-CoV-2 as Compared with SARS-CoV-1"

    R 5 5 BSD 3-Clause "New" or "Revised" License Updated Mar 20, 2020
  • Python Updated Mar 11, 2020
  • labtea Public

    Resources for generating the website for Theoretical Ecology Lab Tea

    Python 1 Updated May 7, 2019
  • .bst and .dbj files for journals that don't provide them

    Updated May 8, 2017