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Final changes before 0.9.0 #517

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Feb 28, 2025
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Final changes before 0.9.0 #517

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7fd6475
Final changes before 0.9.0
alkidbaci Feb 27, 2025
f2634cf
testing only once
alkidbaci Feb 27, 2025
eaa9549
fix for ea_initialization
alkidbaci Feb 28, 2025
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2 changes: 1 addition & 1 deletion .github/workflows/docs.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -53,7 +53,7 @@ jobs:
uses: nwtgck/actions-netlify@v1.2
with:
publish-dir: 'docs/_build/html'
production-branch: develop
production-branch: master
github-token: ${{ secrets.GITHUB_TOKEN }}
deploy-message: "Deploy from GitHub Actions ${{ github.sha }}"
alias: ${{ github.head_ref }}
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9 changes: 4 additions & 5 deletions .github/workflows/test.yml
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Expand Up @@ -24,17 +24,16 @@ jobs:
run: |
ruff check ontolearn/learners/ --line-length=200

- name: Test with pytest
- name: Get external files
run: |
wget https://files.dice-research.org/projects/Ontolearn/KGs.zip
wget https://files.dice-research.org/projects/Ontolearn/LPs.zip
wget https://files.dice-research.org/projects/Ontolearn/CLIP/CLIPData.zip
wget https://files.dice-research.org/projects/NCES/NCES_Ontolearn_Data/NCESData.zip
unzip KGs.zip && unzip LPs.zip && unzip NCESData.zip && unzip CLIPData.zip
pytest -p no:warnings -x

- name: Coverage report
- name: Testing and coverage report
run: |
pip install coverage
coverage run -m pytest
coverage report -m
coverage run -m pytest -p no:warnings -x
coverage report -m
28 changes: 11 additions & 17 deletions docs/usage/02_installation.md
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Expand Up @@ -116,29 +116,23 @@ Follow the same steps to unzip as the in the KGs case.

--------------------------------------------------------

### NCES data:
### Other Data
Below you will find the links to get the necesseray data for _NCES_, _NCES2_, _ROCES_ and _CLIP_.
The process to extract the data is the same as shown earlier with "KGs".

```shell
wget https://files.dice-research.org/projects/NCES/NCES_Ontolearn_Data/NCESData.zip -O ./NCESData.zip
unzip NCESData.zip
rm NCESData.zip
```

If you are getting any error check if the following flags can help:
#NCES:
https://files.dice-research.org/projects/NCES/NCES_Ontolearn_Data/NCESData.zip

```shell
unzip -o NCESData.zip
rm -f NCESData.zip
```
#NCES2:
https://files.dice-research.org/projects/NCES/NCES_Ontolearn_Data/NCES2Data.zip

-------------------------------------------------------
#ROCES:
https://files.dice-research.org/projects/NCES/NCES_Ontolearn_Data/ROCESData.zip

### CLIP data:

```shell
wget https://files.dice-research.org/projects/Ontolearn/CLIP/CLIPData.zip
unzip CLIPData.zip
rm CLIPData.zip
#CLIP:
https://files.dice-research.org/projects/Ontolearn/CLIP/CLIPData.zip
```

## Building (sdist and bdist_wheel)
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3 changes: 3 additions & 0 deletions ontolearn/ea_initialization.py
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Expand Up @@ -30,6 +30,7 @@
from itertools import chain, cycle

from owlapy.class_expression import OWLClass, OWLClassExpression, OWLThing
from owlapy.iri import IRI
from owlapy.owl_individual import OWLNamedIndividual
from owlapy.owl_literal import OWLLiteral
from owlapy.owl_property import OWLDataProperty, OWLObjectProperty
Expand Down Expand Up @@ -241,6 +242,8 @@ def _select_type(self, ind: OWLNamedIndividual) -> OWLClass:
@lru_cache(maxsize=_cache_size)
def _get_types(self, ind: OWLNamedIndividual, direct: bool = False) -> Set[OWLClass]:
inds = set(self.kb.get_types(ind, direct))
if OWLClass(IRI("http://www.w3.org/2002/07/owl#", "NamedIndividual")) in inds:
inds.remove(OWLClass(IRI("http://www.w3.org/2002/07/owl#", "NamedIndividual")))
return inds if inds else {OWLThing}

@lru_cache(maxsize=_cache_size)
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