update copyright years for all files touched

dib-lab · May 15, 2015 · 2d85c44 · 2d85c44
1 parent cad451b
commit 2d85c44
Show file tree

Hide file tree

Showing 79 changed files with 79 additions and 79 deletions.
diff --git a/doc/run-corn-50m.sh b/doc/run-corn-50m.sh
@@ -1,7 +1,7 @@
 #! /bin/bash
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see doc/LICENSE.txt. 
 # Contact: khmer-project@idyll.org
 #

diff --git a/examples/stamps/do.sh b/examples/stamps/do.sh
@@ -1,7 +1,7 @@
 #!/bin/bash
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/khmer/khmer_args.py b/khmer/khmer_args.py
@@ -1,7 +1,7 @@
 #
 # vim: set encoding=utf-8
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2014. It is licensed under
+# Copyright (C) Michigan State University, 2014-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/khmer/thread_utils.py b/khmer/thread_utils.py
@@ -1,6 +1,6 @@
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/lib/graphtest.cc b/lib/graphtest.cc
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/hashbits.cc b/lib/hashbits.cc
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/hashbits.hh b/lib/hashbits.hh
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/hashtable.cc b/lib/hashtable.cc
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/hashtable.hh b/lib/hashtable.hh
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/ht-diff.cc b/lib/ht-diff.cc
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/khmer.hh b/lib/khmer.hh
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/khmer_exception.hh b/lib/khmer_exception.hh
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/labelhash.cc b/lib/labelhash.cc
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/labelhash.hh b/lib/labelhash.hh
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/perf_metrics.cc b/lib/perf_metrics.cc
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/perf_metrics.hh b/lib/perf_metrics.hh
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/primes.hh b/lib/primes.hh
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/read_aligner.cc b/lib/read_aligner.cc
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE. Contact: ctb@msu.edu
 //
 #include "read_aligner.hh"

diff --git a/lib/read_aligner.hh b/lib/read_aligner.hh
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE. Contact: ctb@msu.edu
 //
 

diff --git a/lib/read_parsers.cc b/lib/read_parsers.cc
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/read_parsers.hh b/lib/read_parsers.hh
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/subset.cc b/lib/subset.cc
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2014. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/subset.hh b/lib/subset.hh
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2014. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/test-Colors.cc b/lib/test-Colors.cc
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2013. It is licensed under
+// Copyright (C) Michigan State University, 2013-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/test-HashTables.cc b/lib/test-HashTables.cc
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/test-Parser.cc b/lib/test-Parser.cc
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/trace_logger.cc b/lib/trace_logger.cc
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/lib/trace_logger.hh b/lib/trace_logger.hh
@@ -1,6 +1,6 @@
 //
 // This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-// Copyright (C) Michigan State University, 2009-2013. It is licensed under
+// Copyright (C) Michigan State University, 2009-2015. It is licensed under
 // the three-clause BSD license; see LICENSE.
 // Contact: khmer-project@idyll.org
 //

diff --git a/sandbox/abundance-hist-by-position.py b/sandbox/abundance-hist-by-position.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/assembly-diff-2.py b/sandbox/assembly-diff-2.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/assembly-diff.py b/sandbox/assembly-diff.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/assemstats3.py b/sandbox/assemstats3.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/bloom-count-intersection.py b/sandbox/bloom-count-intersection.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/bloom-count.py b/sandbox/bloom-count.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/build-sparse-graph.py b/sandbox/build-sparse-graph.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2013. It is licensed under
+# Copyright (C) Michigan State University, 2013-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/calc-median-distribution.py b/sandbox/calc-median-distribution.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/collect-variants.py b/sandbox/collect-variants.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2013-2014. It is licensed under
+# Copyright (C) Michigan State University, 2013-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/correct-errors.py b/sandbox/correct-errors.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2014. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/extract-single-partition.py b/sandbox/extract-single-partition.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/fasta-to-abundance-hist.py b/sandbox/fasta-to-abundance-hist.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/filter-below-abund.py b/sandbox/filter-below-abund.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/filter-median-and-pct.py b/sandbox/filter-median-and-pct.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/filter-median.py b/sandbox/filter-median.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/find-high-abund-kmers.py b/sandbox/find-high-abund-kmers.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/graph-size.py b/sandbox/graph-size.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/hi-lo-abundance-by-position.py b/sandbox/hi-lo-abundance-by-position.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #

diff --git a/sandbox/multi-rename.py b/sandbox/multi-rename.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python2
 #
 # This file is part of khmer, https://github.com/dib-lab/khmer/, and is
-# Copyright (C) Michigan State University, 2009-2013. It is licensed under
+# Copyright (C) Michigan State University, 2009-2015. It is licensed under
 # the three-clause BSD license; see LICENSE.
 # Contact: khmer-project@idyll.org
 #