Utilizing multi-environment trials to improve genome-wide association studies and our understanding of crop adaptation: a case study with lentil (Lens culinaris Medik.)

Derek Michael Wright derek.wright@usask.ca 19-02-2021

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Derek Wright, Sandesh Neupane, … and Kirstin E. Bett. (2021) Utilizing multi-environment trials to improve genome-wide association studies and our understanding of crop adaptation: a case study with lentil (Lens culinaris Medik.). Journal??. .

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View as pdf

Source Code Vignette (GWAS_Phenology_Vignette.html)

Contents

• Figures
• Supplemental Figures
• Supplemental Tables
• Additional Figures

AGILE Project

Collaborators

• Department of Plant Sciences and Crop Development Centre, University of Saskatchewan, Saskatoon, Saskatchewan, Canada
• UTAZ

Sponsors

• Saskatchewan Pulse Growers Association
• Western Grains Research Foundation
• GenomePrairie
• GenomeCanada
• Saskatchewan Ministry of Agriculture

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Figures

Figure 1

Additional/Figure_01_plotly.html

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Figure 2

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Figure 3

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Figure 4

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Figure 5

Additional/Figure_05_a_plotly.html

Additional/Figure_05_b_plotly.html

Additional/Figure_05_c_plotly.html

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Figure 6

Additional/Figure_06_c_plotly.html

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Supplemental Tables

Supplemental Table 1

Supplemental_Table_01.csv

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Supplemental Figures

Supplemental Figure 1

Additional/Supplemental_Figure_01_plotly.html

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Supplemental Figure 2

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Supplemental Figure 3

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Additional Figures

Phenotype Data

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Grouped Manhattan Plots

DTF Temperate

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DTF South Asia

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DTF Mediterranean

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Tf and Tc

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Pf and Pc

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PCA + abc Coefficients

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Facetted & Multi-Modeled Manhattan Plots

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