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  1. BaderLab/sciRED BaderLab/sciRED Public

    Jupyter Notebook 8 2

  2. BaderLab/HealthyRatLiverMap BaderLab/HealthyRatLiverMap Public

    R

  3. BaderLab/FLASH-MM-analysis BaderLab/FLASH-MM-analysis Public

    Analysis scripts for benchmarking FLASH-MM and applying it to case-control and cell-type-specific comparisons in scRNA-seq datasets.

    R

  4. MySnooker MySnooker Public

    C++

  5. SpatialPeeler SpatialPeeler Public

    Iterative discovery of disease-associated cell states and interactions in spatial transcriptomics

    Python 1

  6. BaderLab/FLASHMM BaderLab/FLASHMM Public

    Fast and Scalable Single Cell Differential Expression Analysis using Mixed-effects Models

    R 7 1