Bioinformatics Engineer @papaemmelab
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Memorial Sloan Kettering Cancer Center
- New York, NY
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papaemmelab/toil_container
papaemmelab/toil_container Public🐳 Toil + Docker and Singularity.
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PCAP-core
PCAP-core PublicForked from cancerit/PCAP-core
NGS reference implementations and helper code for mapping (originally part of ICGC-TCGA-PanCancer)
Perl
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papaemmelab/split_bed_by_reads
papaemmelab/split_bed_by_reads PublicSplit bed intervals by maximum read counts
Nim 9
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papaemmelab/cookiecutter-toil
papaemmelab/cookiecutter-toil Public🍪 Cookiecutter template for Class Based Toil pipelines.
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papaemmelab/Shukla_Levine_Gundem
papaemmelab/Shukla_Levine_Gundem PublicData for Shukla, Levine, Gundem et al.
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papaemmelab/Domenico_Asimomitis_ICML_2023
papaemmelab/Domenico_Asimomitis_ICML_2023 PublicCode accompanying "High-Resolution Interpretable Classification of Artifacts versus Real Variants in Whole Genome Sequencing Data from Archived Tissue" by Domenico & Asimomitis et al. https://icml-…
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