Code

Find objects bounding boxes#240

Code

Merged

GenevieveBuckley merged 24 commits intodask:maindask/dask-image:mainfrom GenevieveBuckley:find-objectsGenevieveBuckley/dask-image:find-objectsCopy head branch name to clipboardDec 17, 2021

+209

Commits

Commits on Jul 22, 2021

• Alternative find_objects implementation

  GenevieveBuckley

  committed
  9ac92a8

• Dask docs suggest bag.fold is more efficient than bag.reduction

  GenevieveBuckley

  committed
  195edb5

Commits on Jul 23, 2021

• Merge dataframes instead of using combine

  GenevieveBuckley

  committed
  ab90271

• Make find_objects output obviously a dask dataframe

  GenevieveBuckley

  committed
  64d2d87

Commits on Jul 29, 2021

• A clearer way to use dask delayed

  GenevieveBuckley

  committed
  7cf8d7a

• Try to clarify dataframe column naming convention

  GenevieveBuckley

  committed
  4ceeec3

• Additional clarifying comment

  GenevieveBuckley

  committed
  c301e2a

• Default step size for slices is None

  GenevieveBuckley

  committed
  dcc78ee

• Use Marvin's suggestion so we don't have to call compute twice on result

  GenevieveBuckley

  committed
  2bdb70a

• Revert delayed changes

  GenevieveBuckley

  committed
  ce3e17f

• Be consistent with slice step (use default value)

  GenevieveBuckley

  committed
  f120067

• Remove redundant import statement

  GenevieveBuckley

  committed
  299a9eb

• Avoid user having to call compute twice on result

  GenevieveBuckley

  committed
  02a86be

• Fix delayed so we know output is a dask dataframe

  GenevieveBuckley

  committed
  a7479f0

• Use functools partial to pass in array dimension information to _find_objects

  GenevieveBuckley

  committed
  9f812fc

• Improve docstrings in _find_objects.py

  GenevieveBuckley

  committed
  ec20255

• Fix merge conflicts

  GenevieveBuckley

  committed
  7192c00

• Add check for integer array dtype in find_objects

  GenevieveBuckley

  committed
  07ccbd8

Commits on Jul 30, 2021

• Merge branch 'main' into find-objects

  GenevieveBuckley

  committed
  cf5636e

Commits on Dec 16, 2021

• Re-trigger CI

  GenevieveBuckley

  committed
  cc10a93

Commits on Dec 17, 2021

• Improve find_objects docstring re return value

  GenevieveBuckley

  committed
  eba33ee

• find_objects _merge_bounding_boxes, clarify comment

  GenevieveBuckley

  committed
  3205108

• Fix find_objects bug where chunk has no non-zero labels

  GenevieveBuckley

  committed
  d696202

• Add test for find_objects with empty chunk in array

  GenevieveBuckley

  committed
  42b95da