daos-stack · daltonbohning · Oct 1, 2025 · Oct 8, 2025 · Oct 8, 2025 · Oct 8, 2025
diff --git a/.github/CODEOWNERS b/.github/CODEOWNERS
@@ -0,0 +1,2 @@
+# Have Release Engineering added as a reviewer to any packaging PR
+* @daos-stack/build-and-release-watchers
diff --git a/.gitignore b/.gitignore
@@ -0,0 +1,3 @@
+_topdir/
+*.tar.*
+*.code-workspace
diff --git a/E3SM-IO.rpmlintrc b/E3SM-IO.rpmlintrc
@@ -0,0 +1,2 @@
+# This line is mandatory to access the configuration functions
+from Config import *
diff --git a/E3SM-IO.spec b/E3SM-IO.spec
@@ -0,0 +1,155 @@
+%global with_mpich 1
+%if (0%{?rhel} >= 8)
+%global with_openmpi 1
+%global with_openmpi3 0
+%else
+%global with_openmpi 0
+%global with_openmpi3 1
+%endif
+
+%if (0%{?suse_version} >= 1500)
+%global module_load() if [ "%{1}" == "openmpi3" ]; then MODULEPATH=/usr/share/modules module load gnu-openmpi; else MODULEPATH=/usr/share/modules module load gnu-%{1}; fi
+%else
+%global module_load() module load mpi/%{1}-%{_arch}
+%endif
+
+%if %{with_mpich}
+%global mpi_list mpich
+%endif
+%if %{with_openmpi}
+%global mpi_list %{?mpi_list} openmpi
+%endif
+%if %{with_openmpi3}
+%if 0%{?fedora}
+# this would be nice to use but causes issues with linting
+# since that is done on Fedora
+#{error: openmpi3 doesn't exist on Fedora}
+%endif
+%global mpi_list %{?mpi_list} openmpi3
+%endif
+
+%if (0%{?suse_version} >= 1500)
+%global mpi_libdir %{_libdir}/mpi/gcc
+%global mpi_lib_ext lib64
+%global mpi_includedir %{_libdir}/mpi/gcc
+%global mpi_include_ext /include
+%else
+%global mpi_libdir %{_libdir}
+%global mpi_lib_ext lib
+%global mpi_includedir %{_includedir}
+%global mpi_include_ext -%{_arch}
+%endif
+
+%global shortcommit %(c=%{commit};echo ${c:0:7})
+
+Name:		E3SM-IO
+Version:	%{commit}
+Release:	1%{?commit:.g%{shortcommit}}%{?dist}
+Summary:	File utilities designed for scalability and performance
+
+Group:		System Environment/Libraries
+License:	BSD
+URL:		https://github.com/Parallel-NetCDF/E3SM-IO
+Source:		https://github.com/Parallel-NetCDF/E3SM-IO/archive/%{commit}.tar.gz
+BuildRoot:	%_topdir/BUILDROOT
+%if (0%{?suse_version} >= 1500)
+BuildRequires: lua-lmod
+%else
+BuildRequires: Lmod
+%endif
+BuildRequires: autoconf
+BuildRequires: automake
+BuildRequires: gcc-c++
+BuildRequires: libtool
+
+
+%if (0%{?suse_version} > 0)
+%global __debug_package 1
+%global _debuginfo_subpackages 1
+%debug_package
+%endif
+
+%description
+A case study of parallel I/O kernel from the E3SM climate simulation model.
+
+%if %{with_openmpi}
+%package openmpi
+Summary:	A case study of parallel I/O kernel from the E3SM climate simulation model.
+BuildRequires: openmpi-devel
+BuildRequires: hdf5-openmpi-devel
+
+%description openmpi
+A case study of parallel I/O kernel from the E3SM climate simulation model.
+%endif
+
+%if %{with_openmpi3}
+%package openmpi3
+Summary:	A case study of parallel I/O kernel from the E3SM climate simulation model.
+BuildRequires: openmpi3-devel
+BuildRequires: hdf5-openmpi3-devel
+
+%description openmpi3
+A case study of parallel I/O kernel from the E3SM climate simulation model.
+%endif
+
+%if %{with_mpich}
+%package mpich
+Summary:	File utilities designed for scalability and performance
+BuildRequires: mpich-devel
+BuildRequires: hdf5-mpich-devel
+
+%description mpich
+A case study of parallel I/O kernel from the E3SM climate simulation model.
+%endif
+
+
+%prep
+%autosetup -p1
+
+%build
+export CC=mpicc
+export CXX=mpicxx
+export CFLAGS="%{optflags} -fPIC -pie"
+export CPPFLAGS="%{optflags} -fPIC -pie"
+for mpi in %{?mpi_list}; do
+	mkdir $mpi
+	pushd $mpi
+	%module_load $mpi
+	autoreconf -i ../
+	../configure \
+		--with-hdf5=%{mpi_libdir}/$mpi \
+		--prefix=%{mpi_libdir}/$mpi
+	make
+	module purge
+	popd
+done
+
+%install
+rm -rf %{buildroot}
+for mpi in %{?mpi_list}; do
+	%module_load $mpi
+	make install -C $mpi DESTDIR=%{buildroot}
+	module purge
+done
+
+%if %{with_openmpi}
+%files openmpi
+%defattr(-,root,root,-)
+%{mpi_libdir}/openmpi/bin/*
+%endif
+
+%if %{with_openmpi3}
+%files openmpi3
+%defattr(-,root,root,-)
+%{mpi_libdir}/openmpi3/bin/*
+%endif
+
+%if %{with_mpich}
+%files mpich
+%defattr(-,root,root,-)
+%{mpi_libdir}/mpich/bin/*
+%endif
+
+%changelog
+* Wed Oct 01 2025 Dalton A. Bohning <dalton.bohning@hpe.com> - 76a1c2fabd042423493a455ef3ce72577a3848a2-1
+- Initial package
diff --git a/Jenkinsfile b/Jenkinsfile
@@ -0,0 +1,11 @@
+#!/usr/bin/groovy
+// SPDX-License-Identifier: BSD-2-Clause-Patent
+// Copyright 2025 Hewlett Packard Enterprise Development LP
+
+// To use a test branch (i.e. PR) until it lands to master
+// I.e. for testing library changes
+//@Library(value="pipeline-lib@your_branch") _
+
+/* groovylint-disable-next-line CompileStatic */
+packageBuildingPipelineDAOSTest(['distros' : ['el8', 'el9', 'leap15'],
+                                 'test-tag': 'e3smio'])
diff --git a/LICENSE b/LICENSE
@@ -0,0 +1,54 @@
+BSD-2-Clause Plus Patent License
+
+Copyright 2025 Hewlett Packard Enterprise Development LP
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions
+are met:
+
+1. Redistributions of source code must retain the above copyright
+   notice, this list of conditions and the following disclaimer.
+
+2. Redistributions in binary form must reproduce the above copyright
+   notice, this list of conditions and the following disclaimer in
+   the documentation and/or other materials provided with the
+   distribution.
+
+Subject to the terms and conditions of this license, each copyright
+holder and contributor hereby grants to those receiving rights under
+this license a perpetual, worldwide, non-exclusive, no-charge,
+royalty-free, irrevocable (except for failure to satisfy the conditions
+of this license) patent license to make, have made, use, offer to sell,
+sell, import, and otherwise transfer this software, where such license
+applies only to those patent claims, already acquired or hereafter
+acquired, licensable by such copyright holder or contributor that are
+necessarily infringed by:
+
+(a) their Contribution(s) (the licensed copyrights of copyright holders
+    and non-copyrightable additions of contributors, in source or
+    binary form) alone; or
+
+(b) combination of their Contribution(s) with the work of authorship to
+    which such Contribution(s) was added by such copyright holder or
+    contributor, if, at the time the Contribution is added, such
+    addition causes such combination to be necessarily infringed.
+    The patent license shall not apply to any other combinations which
+    include the Contribution.
+
+Except as expressly stated above, no rights or licenses from any
+copyright holder or contributor is granted under this license, whether
+expressly, by implication, estoppel or otherwise.
+
+DISCLAIMER
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
+"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
+LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
+A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
+HOLDERS OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
+SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
+LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
+DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
+THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
+(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
diff --git a/Makefile b/Makefile
@@ -0,0 +1,12 @@
+# SPDX-License-Identifier: BSD-2-Clause-Patent
+# Copyright 2025 Hewlett Packard Enterprise Development LP
+
+NAME      := E3SM-IO
+SRC_EXT   := gz
+REPO_NAME := E3SM-IO-pkg
+PKG_GIT_COMMIT := 76a1c2fabd042423493a455ef3ce72577a3848a2
+GITHUB_PROJECT := Parallel-NetCDF/E3SM-IO
+
+TEST_PACKAGES := $(NAME)-mpich-devel $(NAME)-openmpi3-devel
+
+include packaging/Makefile_packaging.mk
diff --git a/packaging/Dockerfile.centos.7 b/packaging/Dockerfile.centos.7
@@ -0,0 +1,56 @@
+#
+# Copyright 2018-2022, Intel Corporation
+#
+# 'recipe' for Docker to build an RPM
+#
+
+# Pull base image
+FROM centos:centos7
+LABEL maintainer="daos@daos.groups.io"
+
+# Use local repo server if present
+ARG REPO_FILE_URL
+RUN set -e;                                                      \
+    if [ -n "$REPO_FILE_URL" ]; then                             \
+        cd /etc/yum.repos.d/ &&                                  \
+        curl -k -f -o daos_ci-centos7-artifactory.repo.tmp       \
+             "$REPO_FILE_URL"daos_ci-centos7-artifactory.repo && \
+        for file in *.repo; do                                   \
+            true > $file;                                        \
+        done;                                                    \
+        mv daos_ci-centos7-artifactory.repo{.tmp,};              \
+    fi;                                                          \
+    yum -y install dnf;                                          \
+    yum clean all;                                               \
+    dnf --disablerepo \*epel\* -y install epel-release           \
+                                          dnf-plugins-core;      \
+    if [ -n "$REPO_FILE_URL" ]; then                             \
+        dnf -y --quiet config-manager --disable epel;            \
+    fi;                                                          \
+    dnf -y update epel-release;                                  \
+    dnf -y clean all
+
+# use same UID as host and default value of 1000 if not specified
+ARG UID=1000
+
+# Update distribution
+#Nothing to do for CentOS
+
+# Install basic tools
+RUN dnf install -y epel-release
+RUN dnf install -y mock make rpm-build curl createrepo rpmlint redhat-lsb-core \
+                   git python-srpm-macros dnf && dnf -y clean all
+
+# Add build user (to keep rpmbuild happy)
+ENV USER build
+ENV PASSWD build
+RUN useradd -u $UID -ms /bin/bash $USER
+RUN echo "$USER:$PASSWD" | chpasswd
+# add the user to the mock group so it can run mock
+RUN usermod -a -G mock $USER
+
+# mock in Docker needs to use the old-chroot option
+RUN grep use_nspawn /etc/mock/site-defaults.cfg || \
+    echo "config_opts['use_nspawn'] = False" >> /etc/mock/site-defaults.cfg
+
+RUN chmod g+w /etc/mock/default.cfg
diff --git a/packaging/Dockerfile.coverity b/packaging/Dockerfile.coverity
@@ -0,0 +1,33 @@
+#
+# Copyright 2018-2020, Intel Corporation
+# Copyright 2025 Hewlett Packard Enterprise Development LP
+#
+# 'recipe' for Docker to build for a Coverity scan.
+#
+
+# Pull base image
+FROM fedora:latest
+LABEL maintainer="daos-stack <daos@daos.groups.io>""
+
+# use same UID as host and default value of 1000 if not specified
+ARG UID=1000
+
+# Install basic tools
+RUN dnf -y install mock make rpm-build curl createrepo rpmlint redhat-lsb-core \
+                   git python-srpm-macros rpmdevtools
+RUN dnf -y makecache && dnf -y install gcc
+
+# Add build user (to keep rpmbuild happy)
+ENV USER build
+ENV PASSWD build
+RUN useradd -u $UID -ms /bin/bash $USER
+RUN echo "$USER:$PASSWD" | chpasswd
+# add the user to the mock group so it can run mock
+RUN usermod -a -G mock $USER
+
+# mock in Docker needs to use the old-chroot option
+RUN grep use_nspawn || \
+    echo "config_opts['use_nspawn'] = False" >> /etc/mock/site-defaults.cfg
+
+RUN chmod g+w /etc/mock/*
+
Original file line number	Diff line number	Diff line change
		@@ -0,0 +1,2 @@
		# Have Release Engineering added as a reviewer to any packaging PR
		* @daos-stack/build-and-release-watchers
Original file line number	Diff line number	Diff line change
		@@ -0,0 +1,2 @@
		# This line is mandatory to access the configuration functions
		from Config import *