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target branch for v0.9.1 #368

Merged
merged 56 commits into from
Aug 13, 2023
Merged

target branch for v0.9.1 #368

merged 56 commits into from
Aug 13, 2023

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daler
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@daler daler commented Jun 5, 2022

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daler and others added 26 commits July 1, 2023 15:47
Should correctly initialise the build environment
Co-authored-by: Peter Inzani <pi2@sanger.ac.uk>
Co-authored-by: Ryan Dale <ryan.dale@nih.gov>
* first try at gettign sort to accept genome dicts

* BedTool.sort() now accepts g/genome args

- add "genome" to genome_if argument
- remove sorting from chromsizes_to_file to enable non-lexical sorting

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Co-authored-by: Ryan Dale <ryan.dale@nih.gov>
@daler daler merged commit 9876fa2 into master Aug 13, 2023
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5 participants