Fixes #381 closes all .tmp files opened by .save_seqs (#382)

Co-authored-by: Peter Inzani <pi2@sanger.ac.uk> Co-authored-by: Ryan Dale <ryan.dale@nih.gov>
daler · Jul 1, 2023 · 5350e38 · 5350e38
1 parent 4b386cb
commit 5350e38
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/pybedtools/bedtool.py b/pybedtools/bedtool.py
@@ -2712,9 +2712,11 @@ def save_seqs(self, fn):
 
         if not hasattr(self, "seqfn"):
             raise ValueError("Use .sequence(fasta) to get the sequence first")
+
         with open(fn, "w") as fout:
             with open(self.seqfn) as seqfile:
                 fout.write(seqfile.read())
+
         new_bedtool = BedTool(self.fn)
         new_bedtool.seqfn = fn
         return new_bedtool