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onmaster

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Commits on Apr 11, 2024

• added self defined db as an option for annovar

  lamanda0227

  committed
  c2a3e07

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Commits on Feb 12, 2024

• vep minor update

  dianacornejo

  committed
  0e1038e

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• update vep

  dianacornejo

  committed
  3f12727

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• minor update vep

  dianacornejo

  committed
  9142627

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Commits on Nov 27, 2023

• addition to VEP and creation of BAT folder

  dianacornejo

  committed
  f7fc873

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Commits on Nov 17, 2023

• added gnomad custom anno

  dianacornejo

  committed
  3703244

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Commits on Nov 6, 2023

• Merge pull request #175 from dianacornejo/master

  Show description for 6b1b08f
  gaow

  authored
  6b1b08f

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• make Gaos changes to avoid merge issues

  dianacornejo

  committed
  82c90a2

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• fixed burden file generation to accept CADD score

  dianacornejo

  committed
  ec68921

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Commits on Nov 3, 2023

• change parameter option for output tsv

  gaow

  committed
  3ca1fbc

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Commits on Nov 2, 2023

• code to generate burden files for RAP

  dianacornejo

  committed
  406d684

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Commits on Nov 1, 2023

• updated output_name

  dianacornejo

  committed
  1dad058

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• vep updates

  dianacornejo

  committed
  48c9b16

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Commits on Oct 31, 2023

• Fix file extension

  gaow

  committed
  eedd7a6

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• Fix file extension

  gaow

  committed
  600491f

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• Fix gzipped file load

  gaow

  committed
  a6dea32

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• polish up the vep pipeline

  gaow

  committed
  8184f91

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• added the tab option and code to handle output

  dianacornejo

  committed
  6696a3e

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• added the tab option and code to handle output

  dianacornejo

  committed
  c8cedbe

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Commits on Oct 30, 2023

• added tested indel cadd annotation

  dianacornejo

  committed
  5b8665d

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Commits on Oct 25, 2023

• tested CADD for snvs and Loftee annotation

  dianacornejo

  committed
  95d83bc

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Commits on Oct 11, 2023

• changes to annovar

  dianacornejo

  committed
  49b8837

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• Merge branch 'master' of https://github.com/cumc/bioworkflows

  Show description for 0c97296
  dianacornejo

  committed
  0c97296

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• annovar for RAP

  dianacornejo

  committed
  362d299

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• Merge branch 'master' of github.com:cumc/bioworkflows

  gaow

  committed
  5e167a7

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• Add VEP notebook

  gaow

  committed
  591e076

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Commits on Jul 13, 2022

• fix error handeling indels in avinput forma

  dianacornejo

  committed
  905257b

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Commits on Jul 7, 2022

• Make the annotation mapping more general

  UxxUnet

  committed
  ba4b304

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Commits on Jun 29, 2022

• Update the annotation mapping

  UxxUnet

  committed
  0e21488

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Commits on Nov 8, 2021

• fixed issues in LMM, annovar, and SuSiE

  dianacornejo

  committed
  d43a188

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Commits on Oct 26, 2021

• Merge branch 'cumc:master' into master

  dianacornejo

  authored
  58a43bc

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Commits on Oct 20, 2021

• Merge branch 'master' of https://github.com/cumc/bioworkflows into cumc-master

  yuliu426

  committed
  548ce8e

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Commits on Oct 19, 2021

• get rid of the annotations causing problems and use AFE_nfe

  dianacornejo

  committed
  475798b

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Commits on Oct 11, 2021

• work in progress to generate the annofile, setfile and aaffile from the annotation data

  dianacornejo

  committed
  25d97af

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Commits on Aug 25, 2021

• Fixed a bug of burden file generation

  UxxUnet

  committed
  da48542

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