Skip to content

Commit

Permalink
add diff ATACseq
Browse files Browse the repository at this point in the history
  • Loading branch information
crazyhottommy authored Apr 23, 2020
1 parent 2303ace commit cecbbdd
Showing 1 changed file with 3 additions and 0 deletions.
3 changes: 3 additions & 0 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -180,6 +180,9 @@ A review paper [A comprehensive comparison of tools for differential ChIP-seq an

![](./images/choose_diff_tool.png)


* [ATAC-seq normalization method can significantly affect differential accessibility analysis and interpretation](https://epigeneticsandchromatin.biomedcentral.com/articles/10.1186/s13072-020-00342-y)

1. [MultiGPS](http://mahonylab.org/software/multigps/)

2. [PePr](https://github.com/shawnzhangyx/PePr). It can also call peaks.
Expand Down

0 comments on commit cecbbdd

Please sign in to comment.