[DATALAD] Recorded changes

Author: Remi-Gau

src/utils/isZipped.m

@@ -0,0 +1,10 @@
+function status = isZipped(file)
+  %
+  % USAGE::
+  %
+  %    status = isZipped(file)
+  %
+  % (C) Copyright 2022 CPP_SPM developers
+
+  status = strcmp(spm_file(file, 'ext'), 'gz');
+end

src/utils/removeDummies.m

@@ -78,6 +78,9 @@ function removeDummies(varargin)
 
   volumeSplicing(inputFile, 1:numberOfVolumeToDiscard);
 
+  if isZipped(inputFile)
+    inputFile = spm_file(inputFile, 'ext', '');
+  end
   jsonFile = spm_file(inputFile, 'ext', 'json');
 
   metadata.NumberOfVolumesDiscardedByUser = NumberOfVolumesDiscardedByUser;

src/utils/volumeSplicing.m

@@ -8,8 +8,10 @@
   %
   % :param inputFile:
   % :type inputFile: path
+  %
   % :param volumesToRemove:
   % :type volumesToRemove: 1xn or nX1 array
+  %
   % :param outputFile: optional parameter. default: will overwrite
   % ``inputFile``. If only a filename is given, the file will be created in the
   % same folder as the input file.
@@ -90,7 +92,3 @@
   end
 
 end
-
-function status = isZipped(file)
-  status = strcmp(spm_file(file, 'ext'), 'gz');
-end