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[REL] 2.2.0 #221

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Merged
merged 103 commits into from
Nov 2, 2022
Merged

[REL] 2.2.0 #221

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dbde735
transfer doc README to .github repo
Remi-Gau Dec 24, 2021
2adcfea
Merge remote-tracking branch 'cpp-lln-lab/master' into dev
Remi-Gau Jan 27, 2022
30b272a
bump bids matlab
Remi-Gau Jan 27, 2022
2304938
bring back a dead function from the dead...
Remi-Gau Jan 27, 2022
71ad2d7
make some tests less verbose
Remi-Gau Jan 27, 2022
32dd6d7
lint and infra
Remi-Gau Jan 27, 2022
be77b1b
use CFF file
Remi-Gau Jan 28, 2022
27f4d22
remove dependencies
Remi-Gau Jan 28, 2022
5bcf6f3
infra
Remi-Gau Jan 28, 2022
fd637ad
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Jan 28, 2022
7f662c5
make less verbose
Remi-Gau Jan 28, 2022
41c6e08
Merge remote-tracking branch 'origin/remi-bump_bids-matlab' into remi…
Remi-Gau Jan 28, 2022
2cb8a83
simplify README
Remi-Gau Jan 28, 2022
23a39e5
remove TOC
Remi-Gau Jan 28, 2022
48015ff
move copyright mention
Remi-Gau Jan 28, 2022
6f36ee4
fix doc
Remi-Gau Jan 28, 2022
aff9571
make test silent
Remi-Gau Jan 28, 2022
efc0ce8
remove README from tests
Remi-Gau Jan 28, 2022
2cf9684
use bids matlab to create filenames
Remi-Gau Jan 28, 2022
b1fe718
simplify tests
Remi-Gau Jan 28, 2022
045a25a
Merge pull request #186 from Remi-Gau/remi-bump_bids-matlab
Remi-Gau Jan 28, 2022
2ef044b
update bids matlab
Remi-Gau Mar 1, 2022
8cc5d27
improve isPostitive integer
Remi-Gau Mar 1, 2022
f92e349
update tests
Remi-Gau Mar 1, 2022
1aa17d9
remove failing tests comments
Remi-Gau Mar 1, 2022
3d5d73c
fix bids validator test
Remi-Gau Mar 1, 2022
4953d1d
zip stim and physio TSV during conversion
Remi-Gau Mar 1, 2022
968a213
update doc
Remi-Gau Mar 1, 2022
685d232
infra
Remi-Gau Mar 1, 2022
dd639a6
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Mar 1, 2022
45061ba
Merge pull request #188 from Remi-Gau/misc
Remi-Gau Mar 1, 2022
157a420
add release drafter
Remi-Gau Mar 1, 2022
c74d915
Merge pull request #189 from Remi-Gau/misc
Remi-Gau Mar 1, 2022
5eb9bb3
update name manual
Remi-Gau Mar 1, 2022
61e2be6
Merge branch 'dev' of https://github.com/cpp-lln-lab/CPP_BIDS into misc
Remi-Gau Mar 1, 2022
a75bc98
Merge pull request #190 from Remi-Gau/misc
Remi-Gau Mar 1, 2022
c367840
save SoftwarePresentation details if present
Remi-Gau Mar 1, 2022
069bd92
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Mar 1, 2022
8735318
Merge pull request #191 from Remi-Gau/misc
Remi-Gau Mar 1, 2022
7b2b45e
infra
Remi-Gau Mar 2, 2022
3a67904
fix verbose crash when saving
Remi-Gau Mar 9, 2022
5a39f04
updata gitignore
Remi-Gau Mar 9, 2022
48bd708
add infra
Remi-Gau Mar 10, 2022
63a1644
refactor and make sure that prefilled answers are taken into account
Remi-Gau Mar 10, 2022
b379c6f
account for prefilled group
Remi-Gau Mar 10, 2022
ad7a7eb
fix conflicts
Remi-Gau Mar 11, 2022
ac5d2ce
update doc
Remi-Gau Mar 11, 2022
8537f0b
set default verbose in checkDependencies
Remi-Gau Mar 11, 2022
2940588
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Mar 11, 2022
7de62c2
start refactoring GUI
Remi-Gau Mar 11, 2022
a64c725
finish refactoring GUI
Remi-Gau Mar 11, 2022
b61b499
silence link check
Remi-Gau Mar 11, 2022
ab06459
Merge pull request #192 from Remi-Gau/dev
Remi-Gau Mar 11, 2022
83cf260
remove duplicate in gitignore
Remi-Gau Mar 18, 2022
8423fc3
update bids matlab
Remi-Gau Mar 18, 2022
b9f9788
refactor createJSON
Remi-Gau Mar 18, 2022
14f2321
basic function to save config
Remi-Gau Mar 18, 2022
f234a72
cover other use case of the API
Remi-Gau Mar 18, 2022
509535c
update doc
Remi-Gau Mar 18, 2022
3c20a7d
fix doc
Remi-Gau Mar 18, 2022
1d656b6
Merge pull request #193 from Remi-Gau/save_config
Remi-Gau Mar 23, 2022
627ceef
fix bug of default users when prespecified
Remi-Gau Mar 24, 2022
bdd0088
refactor removing date entity
Remi-Gau Apr 16, 2022
d60b2c3
refactor removing date entity and allow to fitler source to raw conve…
Remi-Gau Apr 16, 2022
e0703ba
make sure raw dataset is bids valid
Remi-Gau Apr 16, 2022
7bc55c0
update CI
Remi-Gau Apr 16, 2022
e97fcce
Merge pull request #197 from Remi-Gau/rm_data
Remi-Gau Apr 27, 2022
1de05d3
set up module autoupdate on dev branch
Remi-Gau May 7, 2022
9a3baeb
Merge branch 'dev' of https://github.com/cpp-lln-lab/CPP_BIDS into dev
Remi-Gau May 7, 2022
352f05b
Merge branch 'master' into dev
Remi-Gau May 7, 2022
a45e833
run CI in all branches
Remi-Gau May 7, 2022
052381b
update bids matlab
Remi-Gau May 7, 2022
c4a37b8
Merge branch 'master' of https://github.com/cpp-lln-lab/CPP_BIDS into…
Remi-Gau Jun 25, 2022
f9ebc85
use bids transformers to filter tsv files
Remi-Gau Jun 25, 2022
0d3cbe5
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Jun 25, 2022
b32c392
update bids matlab
Remi-Gau Jun 25, 2022
5d83e72
Merge pull request #204 from Remi-Gau/dev
Remi-Gau Jun 25, 2022
d41ab87
Merge branch 'master' into dev
Remi-Gau Aug 27, 2022
b9384a2
update bids matlab
Remi-Gau Aug 27, 2022
a46f53c
add dependabot
Remi-Gau Aug 27, 2022
1d0f9ea
add possibility to not ask for run number
Remi-Gau Aug 27, 2022
03d9792
remove util folder
Remi-Gau Aug 27, 2022
3f0cedf
fix path printing issues with windows
Remi-Gau Sep 7, 2022
630702a
lint
Remi-Gau Sep 7, 2022
8bf435f
update init
Remi-Gau Sep 9, 2022
8334de1
update doc
Remi-Gau Sep 9, 2022
1521b4f
fix tests
Remi-Gau Sep 9, 2022
752b686
fix doc
Remi-Gau Sep 9, 2022
b601db6
fix test and lint
Remi-Gau Sep 9, 2022
2a90d4a
update BIDS matlab
Remi-Gau Sep 10, 2022
2839d31
Merge pull request #213 from Remi-Gau/init
Remi-Gau Sep 10, 2022
00c0632
only rm necessary global variables
Remi-Gau Sep 12, 2022
d293895
Merge remote-tracking branch 'upstream/master' into dev
Remi-Gau Nov 2, 2022
8fa7b40
update submodules
Remi-Gau Nov 2, 2022
c790ca9
only use dependabot to update submodules
Remi-Gau Nov 2, 2022
2d56abc
let precommit handle check linting
Remi-Gau Nov 2, 2022
dcdad52
fix coverage
Remi-Gau Nov 2, 2022
708b590
update README
Remi-Gau Nov 2, 2022
b18cb81
update copyright format in help - closes #215
Remi-Gau Nov 2, 2022
805667e
revert isfolder to isdir
Remi-Gau Nov 2, 2022
dd1c352
update version
Remi-Gau Nov 2, 2022
26a9602
update manual
Remi-Gau Nov 2, 2022
db9f238
run tests on ubuntu 22 04
Remi-Gau Nov 2, 2022
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fix doc
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@Remi-Gau
Remi-Gau committed Mar 18, 2022
commit 3c20a7d1286887c6f55996009b43d9d141f42423
2 changes: 1 addition & 1 deletion src/saveCfg.m
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Expand Up @@ -4,7 +4,7 @@
%
% USAGE::
%
% createJson(cfg [, filename])
% saveCfg(cfg [, filename])
%
% :param cfg: Required. Configuration. See ``checkCFG()``.
% :type cfg: structure
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