Open
Description
openedon May 6, 2022
Solution to issue cannot be found in the documentation.
- I checked the documentation.
Issue
Installing default versions of both JAX and Tensorflow from conda-forge currently results in an inconsistent environment in which neither of them can be imported. Using either of the two separately is fine.
I can recreate this in the miniforge3 docker image like this
FROM condaforge/miniforge3
RUN conda install tensorflow jax
RUN conda list
RUN conda info
RUN python -c 'import tensorflow'
# this also fails
# RUN python -c 'import jax'
which gives the following error:
#7 [5/5] RUN python -c 'import tensorflow'
#7 sha256:c7f1bae8ee24e9614e6e17d5be2614442a2df455b7b3733c3f1e4b8b7a40132a
#7 2.331 Traceback (most recent call last):
#7 2.331 File "<string>", line 1, in <module>
#7 2.331 File "/opt/conda/lib/python3.9/site-packages/tensorflow/__init__.py", line 55, in <module>
#7 2.331 from ._api.v2 import compat
#7 2.331 File "/opt/conda/lib/python3.9/site-packages/tensorflow/_api/v2/compat/__init__.py", line 39, in <module>
#7 2.331 from . import v1
#7 2.331 File "/opt/conda/lib/python3.9/site-packages/tensorflow/_api/v2/compat/v1/__init__.py", line 34, in <module>
#7 2.331 from . import compat
#7 2.331 File "/opt/conda/lib/python3.9/site-packages/tensorflow/_api/v2/compat/v1/compat/__init__.py", line 39, in <module>
#7 2.333 from . import v1
#7 2.333 File "/opt/conda/lib/python3.9/site-packages/tensorflow/_api/v2/compat/v1/compat/v1/__init__.py", line 51, in <module>
#7 2.334 from tensorflow._api.v2.compat.v1 import lite
#7 2.334 File "/opt/conda/lib/python3.9/site-packages/tensorflow/_api/v2/compat/v1/lite/__init__.py", line 11, in <module>
#7 2.334 from . import experimental
#7 2.334 File "/opt/conda/lib/python3.9/site-packages/tensorflow/_api/v2/compat/v1/lite/experimental/__init__.py", line 10, in <module>
#7 2.334 from . import authoring
#7 2.334 File "/opt/conda/lib/python3.9/site-packages/tensorflow/_api/v2/compat/v1/lite/experimental/authoring/__init__.py", line 10, in <module>
#7 2.334 from tensorflow.lite.python.authoring.authoring import compatible
#7 2.334 File "/opt/conda/lib/python3.9/site-packages/tensorflow/lite/python/authoring/authoring.py", line 43, in <module>
#7 2.335 from tensorflow.lite.python import convert
#7 2.335 File "/opt/conda/lib/python3.9/site-packages/tensorflow/lite/python/convert.py", line 33, in <module>
#7 2.335 from tensorflow.lite.python import util
#7 2.335 File "/opt/conda/lib/python3.9/site-packages/tensorflow/lite/python/util.py", line 55, in <module>
#7 2.335 from jax import xla_computation as _xla_computation
#7 2.335 File "/opt/conda/lib/python3.9/site-packages/jax/__init__.py", line 37, in <module>
#7 2.335 from jax import config as _config_module
#7 2.335 File "/opt/conda/lib/python3.9/site-packages/jax/config.py", line 18, in <module>
#7 2.335 from jax._src.config import config
#7 2.335 File "/opt/conda/lib/python3.9/site-packages/jax/_src/config.py", line 27, in <module>
#7 2.335 from jax._src import lib
#7 2.335 File "/opt/conda/lib/python3.9/site-packages/jax/_src/lib/__init__.py", line 101, in <module>
#7 2.335 version = check_jaxlib_version(
#7 2.335 File "/opt/conda/lib/python3.9/site-packages/jax/_src/lib/__init__.py", line 90, in check_jaxlib_version
#7 2.336 raise RuntimeError(msg)
#7 2.336 RuntimeError: jaxlib is version 0.1.75, but this version of jax requires version >= 0.3.2.
#7 ERROR: executor failed running [/bin/sh -c python -c 'import tensorflow']: exit code: 1
Installed packages
#5 [3/5] RUN conda list
#5 sha256:1b4a2bef8e285ea7908ee767af6ddccd2b54750f9f686f79b9cdf637ae8dbacc
#5 1.412 # packages in environment at /opt/conda:
#5 1.412 #
#5 1.412 # Name Version Build Channel
#5 1.412 _libgcc_mutex 0.1 conda_forge conda-forge
#5 1.412 _openmp_mutex 4.5 1_gnu conda-forge
#5 1.412 abseil-cpp 20210324.2 h9c3ff4c_0 conda-forge
#5 1.412 absl-py 1.0.0 pyhd8ed1ab_0 conda-forge
#5 1.412 aiohttp 3.8.1 py39hb9d737c_1 conda-forge
#5 1.412 aiosignal 1.2.0 pyhd8ed1ab_0 conda-forge
#5 1.412 astunparse 1.6.3 pyhd8ed1ab_0 conda-forge
#5 1.412 async-timeout 4.0.2 pyhd8ed1ab_0 conda-forge
#5 1.412 attrs 21.4.0 pyhd8ed1ab_0 conda-forge
#5 1.412 blinker 1.4 py_1 conda-forge
#5 1.412 brotlipy 0.7.0 py39h3811e60_1003 conda-forge
#5 1.412 bzip2 1.0.8 h7f98852_4 conda-forge
#5 1.412 c-ares 1.18.1 h7f98852_0 conda-forge
#5 1.412 ca-certificates 2021.10.8 ha878542_0 conda-forge
#5 1.412 cached-property 1.5.2 hd8ed1ab_1 conda-forge
#5 1.412 cached_property 1.5.2 pyha770c72_1 conda-forge
#5 1.412 cachetools 4.2.4 pyhd8ed1ab_0 conda-forge
#5 1.412 certifi 2021.10.8 py39hf3d152e_2 conda-forge
#5 1.412 cffi 1.15.0 py39h4bc2ebd_0 conda-forge
#5 1.412 charset-normalizer 2.0.12 pyhd8ed1ab_0 conda-forge
#5 1.412 click 8.1.3 py39hf3d152e_0 conda-forge
#5 1.412 colorama 0.4.4 pyh9f0ad1d_0 conda-forge
#5 1.412 conda 4.12.0 py39hf3d152e_0 conda-forge
#5 1.412 conda-package-handling 1.8.0 py39hb9d737c_0 conda-forge
#5 1.412 cryptography 36.0.2 py39hd97740a_0 conda-forge
#5 1.412 frozenlist 1.3.0 py39hb9d737c_1 conda-forge
#5 1.412 gast 0.4.0 pyh9f0ad1d_0 conda-forge
#5 1.412 giflib 5.2.1 h36c2ea0_2 conda-forge
#5 1.412 google-auth 1.35.0 pyh6c4a22f_0 conda-forge
#5 1.412 google-auth-oauthlib 0.4.6 pyhd8ed1ab_0 conda-forge
#5 1.412 google-pasta 0.2.0 pyh8c360ce_0 conda-forge
#5 1.412 grpc-cpp 1.42.0 ha1441d3_1 conda-forge
#5 1.412 grpcio 1.42.0 py39hff7568b_0 conda-forge
#5 1.412 h5py 3.6.0 nompi_py39h7e08c79_100 conda-forge
#5 1.412 hdf5 1.12.1 nompi_h2386368_104 conda-forge
#5 1.412 icu 69.1 h9c3ff4c_0 conda-forge
#5 1.412 idna 3.3 pyhd8ed1ab_0 conda-forge
#5 1.412 importlib-metadata 4.11.3 py39hf3d152e_1 conda-forge
#5 1.412 jax 0.3.7 pyhd8ed1ab_0 conda-forge
#5 1.412 jaxlib 0.1.75 py39hde0f152_0 conda-forge
#5 1.412 jpeg 9e h166bdaf_1 conda-forge
#5 1.412 keras 2.7.0 pyhd8ed1ab_0 conda-forge
#5 1.412 keras-preprocessing 1.1.2 pyhd8ed1ab_0 conda-forge
#5 1.412 keyutils 1.6.1 h166bdaf_0 conda-forge
#5 1.412 krb5 1.19.3 h3790be6_0 conda-forge
#5 1.412 ld_impl_linux-64 2.36.1 hea4e1c9_2 conda-forge
#5 1.412 libblas 3.9.0 14_linux64_openblas conda-forge
#5 1.412 libcblas 3.9.0 14_linux64_openblas conda-forge
#5 1.412 libcurl 7.83.0 h7bff187_0 conda-forge
#5 1.412 libedit 3.1.20191231 he28a2e2_2 conda-forge
#5 1.412 libev 4.33 h516909a_1 conda-forge
#5 1.412 libffi 3.4.2 h7f98852_5 conda-forge
#5 1.412 libgcc-ng 11.2.0 h1d223b6_14 conda-forge
#5 1.412 libgfortran-ng 11.2.0 h69a702a_16 conda-forge
#5 1.412 libgfortran5 11.2.0 h5c6108e_16 conda-forge
#5 1.412 libgomp 11.2.0 h1d223b6_14 conda-forge
#5 1.412 liblapack 3.9.0 14_linux64_openblas conda-forge
#5 1.412 libnghttp2 1.47.0 h727a467_0 conda-forge
#5 1.412 libnsl 2.0.0 h7f98852_0 conda-forge
#5 1.412 libopenblas 0.3.20 pthreads_h78a6416_0 conda-forge
#5 1.412 libpng 1.6.37 h21135ba_2 conda-forge
#5 1.412 libprotobuf 3.19.4 h780b84a_0 conda-forge
#5 1.412 libssh2 1.10.0 ha56f1ee_2 conda-forge
#5 1.412 libstdcxx-ng 11.2.0 he4da1e4_16 conda-forge
#5 1.412 libuuid 2.32.1 h7f98852_1000 conda-forge
#5 1.412 libzlib 1.2.11 h36c2ea0_1013 conda-forge
#5 1.412 markdown 3.3.7 pyhd8ed1ab_0 conda-forge
#5 1.412 multidict 6.0.2 py39hb9d737c_1 conda-forge
#5 1.412 ncurses 6.3 h9c3ff4c_0 conda-forge
#5 1.412 numpy 1.22.3 py39hc58783e_2 conda-forge
#5 1.412 oauthlib 3.2.0 pyhd8ed1ab_0 conda-forge
#5 1.412 openssl 1.1.1o h166bdaf_0 conda-forge
#5 1.412 opt_einsum 3.3.0 pyhd8ed1ab_1 conda-forge
#5 1.412 pip 22.0.4 pyhd8ed1ab_0 conda-forge
#5 1.412 protobuf 3.19.4 py39he80948d_0 conda-forge
#5 1.412 pyasn1 0.4.8 py_0 conda-forge
#5 1.412 pyasn1-modules 0.2.7 py_0 conda-forge
#5 1.412 pycosat 0.6.3 py39h3811e60_1009 conda-forge
#5 1.412 pycparser 2.21 pyhd8ed1ab_0 conda-forge
#5 1.412 pyjwt 2.3.0 pyhd8ed1ab_1 conda-forge
#5 1.412 pyopenssl 22.0.0 pyhd8ed1ab_0 conda-forge
#5 1.412 pysocks 1.7.1 py39hf3d152e_4 conda-forge
#5 1.412 python 3.9.10 h85951f9_2_cpython conda-forge
#5 1.412 python-flatbuffers 2.0 pyhd8ed1ab_0 conda-forge
#5 1.412 python_abi 3.9 2_cp39 conda-forge
#5 1.412 pyu2f 0.1.5 pyhd8ed1ab_0 conda-forge
#5 1.412 re2 2021.11.01 h9c3ff4c_0 conda-forge
#5 1.412 readline 8.1 h46c0cb4_0 conda-forge
#5 1.412 requests 2.27.1 pyhd8ed1ab_0 conda-forge
#5 1.412 requests-oauthlib 1.3.1 pyhd8ed1ab_0 conda-forge
#5 1.412 rsa 4.8 pyhd8ed1ab_0 conda-forge
#5 1.412 ruamel_yaml 0.15.80 py39h3811e60_1006 conda-forge
#5 1.412 scipy 1.8.0 py39hee8e79c_1 conda-forge
#5 1.412 setuptools 60.10.0 py39hf3d152e_0 conda-forge
#5 1.412 six 1.16.0 pyh6c4a22f_0 conda-forge
#5 1.412 snappy 1.1.8 he1b5a44_3 conda-forge
#5 1.412 sqlite 3.37.1 h4ff8645_0 conda-forge
#5 1.412 tensorboard 2.6.0 pyhd8ed1ab_1 conda-forge
#5 1.412 tensorboard-data-server 0.6.0 py39hd97740a_2 conda-forge
#5 1.412 tensorboard-plugin-wit 1.8.1 pyhd8ed1ab_0 conda-forge
#5 1.412 tensorflow 2.7.0 cpu_py39h4655687_0 conda-forge
#5 1.412 tensorflow-base 2.7.0 cpu_py39hf4995fd_0 conda-forge
#5 1.412 tensorflow-estimator 2.7.0 cpu_py39ha241409_0 conda-forge
#5 1.412 termcolor 1.1.0 py_2 conda-forge
#5 1.412 tk 8.6.12 h27826a3_0 conda-forge
#5 1.412 tqdm 4.63.0 pyhd8ed1ab_0 conda-forge
#5 1.412 typing-extensions 4.2.0 hd8ed1ab_1 conda-forge
#5 1.412 typing_extensions 4.2.0 pyha770c72_1 conda-forge
#5 1.412 tzdata 2022a h191b570_0 conda-forge
#5 1.412 urllib3 1.26.9 pyhd8ed1ab_0 conda-forge
#5 1.412 werkzeug 2.1.2 pyhd8ed1ab_1 conda-forge
#5 1.412 wheel 0.37.1 pyhd8ed1ab_0 conda-forge
#5 1.412 wrapt 1.14.1 py39hb9d737c_0 conda-forge
#5 1.412 xz 5.2.5 h516909a_1 conda-forge
#5 1.412 yaml 0.2.5 h7f98852_2 conda-forge
#5 1.412 yarl 1.7.2 py39hb9d737c_2 conda-forge
#5 1.412 zipp 3.8.0 pyhd8ed1ab_0 conda-forge
#5 1.412 zlib 1.2.11 h36c2ea0_1013 conda-forgeEnvironment info
#6 [4/5] RUN conda info
#6 sha256:e04dec7bc9e71b96d819465250e444e4080f1874b5342685a25c0744c32e910d
#6 0.730
#6 0.730 active environment : None
#6 0.730 user config file : /root/.condarc
#6 0.730 populated config files : /opt/conda/.condarc
#6 0.730 conda version : 4.12.0
#6 0.730 conda-build version : not installed
#6 0.730 python version : 3.9.10.final.0
#6 0.730 virtual packages : __linux=5.10.47=0
#6 0.730 __glibc=2.31=0
#6 0.730 __unix=0=0
#6 0.730 __archspec=1=x86_64
#6 0.730 base environment : /opt/conda (writable)
#6 0.730 conda av data dir : /opt/conda/etc/conda
#6 0.730 conda av metadata url : None
#6 0.730 channel URLs : https://conda.anaconda.org/conda-forge/linux-64
#6 0.730 https://conda.anaconda.org/conda-forge/noarch
#6 0.730 package cache : /opt/conda/pkgs
#6 0.730 /root/.conda/pkgs
#6 0.730 envs directories : /opt/conda/envs
#6 0.730 /root/.conda/envs
#6 0.730 platform : linux-64
#6 0.730 user-agent : conda/4.12.0 requests/2.27.1 CPython/3.9.10 Linux/5.10.47-linuxkit ubuntu/20.04.4 glibc/2.31
#6 0.730 UID:GID : 0:0
#6 0.730 netrc file : None
#6 0.730 offline mode : False
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