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chore: Make parquet reader options Comet options instead of Hadoop op…
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…tions (apache#968)

* fix: Make parquet reader options Comet options instead of hadoop options.

* Add additional test with configuration set thru spark sql config

* Add configuration check in unit test

* style fix
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parthchandra authored Oct 7, 2024
1 parent 0028f1e commit 0667c60
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Showing 5 changed files with 156 additions and 36 deletions.
50 changes: 17 additions & 33 deletions common/src/main/java/org/apache/comet/parquet/ReadOptions.java
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Expand Up @@ -26,37 +26,15 @@
import org.apache.spark.SparkEnv;
import org.apache.spark.launcher.SparkLauncher;

import org.apache.comet.CometConf;

/**
* Comet specific Parquet related read options.
*
* <p>TODO: merge this with {@link org.apache.parquet.HadoopReadOptions} once PARQUET-2203 is done.
*/
public class ReadOptions {
private static final Logger LOG = LoggerFactory.getLogger(ReadOptions.class);
public static final String COMET_PARQUET_PARALLEL_IO_ENABLED =
"comet.parquet.read.parallel.io.enabled";
public static final boolean COMET_PARQUET_PARALLEL_IO_ENABLED_DEFAULT = true;

public static final String COMET_PARQUET_PARALLEL_IO_THREADS =
"comet.parquet.read.parallel.io.thread-pool.size";
public static final int COMET_PARQUET_PARALLEL_IO_THREADS_DEFAULT = 32;

public static final String COMET_IO_MERGE_RANGES = "comet.parquet.read.io.mergeRanges";
private static final boolean COMET_IO_MERGE_RANGES_DEFAULT = true;

public static final String COMET_IO_MERGE_RANGES_DELTA =
"comet.parquet.read.io.mergeRanges.delta";
private static final int COMET_IO_MERGE_RANGES_DELTA_DEFAULT = 1 << 23; // 8 MB

// In the parallel reader, if the read ranges submitted are skewed in sizes, this
// option will cause the reader to break up larger read ranges into smaller ranges
// to reduce the skew. This will result in a slightly larger number of connections
// opened to the file system but may give improved performance.
// The option is off by default.
public static final String COMET_IO_ADJUST_READRANGE_SKEW =
"comet.parquet.read.io.adjust.readRange.skew";

private static final boolean COMET_IO_ADJUST_READRANGE_SKEW_DEFAULT = false;

// Max number of concurrent tasks we expect. Used to autoconfigure S3 client connections
public static final int S3A_MAX_EXPECTED_PARALLELISM = 32;
Expand Down Expand Up @@ -112,10 +90,6 @@ public static Builder builder(Configuration conf) {
return new Builder(conf);
}

public static Builder builder() {
return builder(new Configuration());
}

public static class Builder {
private final Configuration conf;

Expand Down Expand Up @@ -173,14 +147,24 @@ public Builder(Configuration conf) {
this.conf = conf;
this.parallelIOEnabled =
conf.getBoolean(
COMET_PARQUET_PARALLEL_IO_ENABLED, COMET_PARQUET_PARALLEL_IO_ENABLED_DEFAULT);
CometConf.COMET_PARQUET_PARALLEL_IO_ENABLED().key(),
(Boolean) CometConf.COMET_PARQUET_PARALLEL_IO_ENABLED().defaultValue().get());
this.parallelIOThreadPoolSize =
conf.getInt(COMET_PARQUET_PARALLEL_IO_THREADS, COMET_PARQUET_PARALLEL_IO_THREADS_DEFAULT);
this.ioMergeRanges = conf.getBoolean(COMET_IO_MERGE_RANGES, COMET_IO_MERGE_RANGES_DEFAULT);
conf.getInt(
CometConf.COMET_PARQUET_PARALLEL_IO_THREADS().key(),
(Integer) CometConf.COMET_PARQUET_PARALLEL_IO_THREADS().defaultValue().get());
this.ioMergeRanges =
conf.getBoolean(
CometConf.COMET_IO_MERGE_RANGES().key(),
(boolean) CometConf.COMET_IO_MERGE_RANGES().defaultValue().get());
this.ioMergeRangesDelta =
conf.getInt(COMET_IO_MERGE_RANGES_DELTA, COMET_IO_MERGE_RANGES_DELTA_DEFAULT);
conf.getInt(
CometConf.COMET_IO_MERGE_RANGES_DELTA().key(),
(Integer) CometConf.COMET_IO_MERGE_RANGES_DELTA().defaultValue().get());
this.adjustReadRangeSkew =
conf.getBoolean(COMET_IO_ADJUST_READRANGE_SKEW, COMET_IO_ADJUST_READRANGE_SKEW_DEFAULT);
conf.getBoolean(
CometConf.COMET_IO_ADJUST_READRANGE_SKEW().key(),
(Boolean) CometConf.COMET_IO_ADJUST_READRANGE_SKEW().defaultValue().get());
// override some S3 defaults
setS3Config();
}
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42 changes: 42 additions & 0 deletions common/src/main/scala/org/apache/comet/CometConf.scala
Original file line number Diff line number Diff line change
Expand Up @@ -74,6 +74,48 @@ object CometConf extends ShimCometConf {
.booleanConf
.createWithDefault(true)

val COMET_PARQUET_PARALLEL_IO_ENABLED: ConfigEntry[Boolean] =
conf("spark.comet.parquet.read.parallel.io.enabled")
.doc(
"Whether to enable Comet's parallel reader for Parquet files. The parallel reader reads " +
"ranges of consecutive data in a file in parallel. It is faster for large files and " +
"row groups but uses more resources. The parallel reader is enabled by default.")
.booleanConf
.createWithDefault(true)

val COMET_PARQUET_PARALLEL_IO_THREADS: ConfigEntry[Int] =
conf("spark.comet.parquet.read.parallel.io.thread-pool.size")
.doc("The maximum number of parallel threads the parallel reader will use in a single " +
"executor. For executors configured with a smaller number of cores, use a smaller number.")
.intConf
.createWithDefault(16)

val COMET_IO_MERGE_RANGES: ConfigEntry[Boolean] =
conf("spark.comet.parquet.read.io.mergeRanges")
.doc(
"When enabled the parallel reader will try to merge ranges of data that are separated " +
"by less than 'comet.parquet.read.io.mergeRanges.delta' bytes. Longer continuous reads " +
"are faster on cloud storage. The default behavior is to merge consecutive ranges.")
.booleanConf
.createWithDefault(true)

val COMET_IO_MERGE_RANGES_DELTA: ConfigEntry[Int] =
conf("spark.comet.parquet.read.io.mergeRanges.delta")
.doc(
"The delta in bytes between consecutive read ranges below which the parallel reader " +
"will try to merge the ranges. The default is 8MB.")
.intConf
.createWithDefault(1 << 23) // 8 MB

val COMET_IO_ADJUST_READRANGE_SKEW: ConfigEntry[Boolean] =
conf("spark.comet.parquet.read.io.adjust.readRange.skew")
.doc("In the parallel reader, if the read ranges submitted are skewed in sizes, this " +
"option will cause the reader to break up larger read ranges into smaller ranges to " +
"reduce the skew. This will result in a slightly larger number of connections opened to " +
"the file system but may give improved performance. The option is off by default.")
.booleanConf
.createWithDefault(false)

val COMET_CONVERT_FROM_PARQUET_ENABLED: ConfigEntry[Boolean] =
conf("spark.comet.convert.parquet.enabled")
.doc(
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Original file line number Diff line number Diff line change
Expand Up @@ -67,6 +67,8 @@
import org.apache.parquet.schema.PrimitiveType.PrimitiveTypeName;
import org.apache.parquet.schema.Types;

import org.apache.comet.CometConf;

import static org.apache.parquet.column.Encoding.*;
import static org.apache.parquet.format.converter.ParquetMetadataConverter.MAX_STATS_SIZE;
import static org.junit.Assert.*;
Expand Down Expand Up @@ -615,12 +617,12 @@ public void testColumnIndexReadWrite() throws Exception {
@Test
public void testWriteReadMergeScanRange() throws Throwable {
Configuration conf = new Configuration();
conf.set(ReadOptions.COMET_IO_MERGE_RANGES, Boolean.toString(true));
conf.set(CometConf.COMET_IO_MERGE_RANGES().key(), Boolean.toString(true));
// Set the merge range delta so small that ranges do not get merged
conf.set(ReadOptions.COMET_IO_MERGE_RANGES_DELTA, Integer.toString(1024));
conf.set(CometConf.COMET_IO_MERGE_RANGES_DELTA().key(), Integer.toString(1024));
testReadWrite(conf, 2, 1024);
// Set the merge range delta so large that all ranges get merged
conf.set(ReadOptions.COMET_IO_MERGE_RANGES_DELTA, Integer.toString(1024 * 1024));
conf.set(CometConf.COMET_IO_MERGE_RANGES_DELTA().key(), Integer.toString(1024 * 1024));
testReadWrite(conf, 2, 1024);
}

Expand Down
5 changes: 5 additions & 0 deletions docs/source/user-guide/configs.md
Original file line number Diff line number Diff line change
Expand Up @@ -66,6 +66,11 @@ Comet provides the following configuration settings.
| spark.comet.memory.overhead.min | Minimum amount of additional memory to be allocated per executor process for Comet, in MiB. | 402653184b |
| spark.comet.nativeLoadRequired | Whether to require Comet native library to load successfully when Comet is enabled. If not, Comet will silently fallback to Spark when it fails to load the native lib. Otherwise, an error will be thrown and the Spark job will be aborted. | false |
| spark.comet.parquet.enable.directBuffer | Whether to use Java direct byte buffer when reading Parquet. By default, this is false | false |
| spark.comet.parquet.read.io.adjust.readRange.skew | In the parallel reader, if the read ranges submitted are skewed in sizes, this option will cause the reader to break up larger read ranges into smaller ranges to reduce the skew. This will result in a slightly larger number of connections opened to the file system but may give improved performance. The option is off by default. | false |
| spark.comet.parquet.read.io.mergeRanges | When enabled the parallel reader will try to merge ranges of data that are separated by less than 'comet.parquet.read.io.mergeRanges.delta' bytes. Longer continuous reads are faster on cloud storage. The default behavior is to merge consecutive ranges. | true |
| spark.comet.parquet.read.io.mergeRanges.delta | The delta in bytes between consecutive read ranges below which the parallel reader will try to merge the ranges. The default is 8MB. | 8388608 |
| spark.comet.parquet.read.parallel.io.enabled | Whether to enable Comet's parallel reader for Parquet files. The parallel reader reads ranges of consecutive data in a file in parallel. It is faster for large files and row groups but uses more resources. The parallel reader is enabled by default. | true |
| spark.comet.parquet.read.parallel.io.thread-pool.size | The maximum number of parallel threads the parallel reader will use in a single executor. For executors configured with a smaller number of cores, use a smaller number. | 16 |
| spark.comet.regexp.allowIncompatible | Comet is not currently fully compatible with Spark for all regular expressions. Set this config to true to allow them anyway using Rust's regular expression engine. See compatibility guide for more information. | false |
| spark.comet.scan.enabled | Whether to enable native scans. When this is turned on, Spark will use Comet to read supported data sources (currently only Parquet is supported natively). Note that to enable native vectorized execution, both this config and 'spark.comet.exec.enabled' need to be enabled. By default, this config is true. | true |
| spark.comet.scan.preFetch.enabled | Whether to enable pre-fetching feature of CometScan. By default is disabled. | false |
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -1280,6 +1280,93 @@ abstract class ParquetReadSuite extends CometTestBase {
}
}
}

test("test merge scan range") {
def makeRawParquetFile(path: Path, n: Int): Seq[Option[Int]] = {
val dictionaryPageSize = 1024
val pageRowCount = 500
val schemaStr =
"""
|message root {
| optional int32 _1(INT_16);
| optional int32 _2;
| optional int64 _3;
|}
""".stripMargin

val schema = MessageTypeParser.parseMessageType(schemaStr)
val writer = createParquetWriter(
schema,
path,
dictionaryEnabled = true,
dictionaryPageSize = dictionaryPageSize,
pageRowCountLimit = pageRowCount)

val rand = scala.util.Random
val expected = (0 until n).map { i =>
// use a single value for the first page, to make sure dictionary encoding kicks in
val value = if (i < pageRowCount) i % 8 else i
if (rand.nextBoolean()) None
else Some(value)
}

expected.foreach { opt =>
val record = new SimpleGroup(schema)
opt match {
case Some(i) =>
record.add(0, i.toShort)
record.add(1, i)
record.add(2, i.toLong)
case _ =>
}
writer.write(record)
}

writer.close()
expected
}

Seq(16, 128).foreach { batchSize =>
Seq(1024, 1024 * 1024).foreach { mergeRangeDelta =>
{
withSQLConf(
CometConf.COMET_BATCH_SIZE.key -> batchSize.toString,
CometConf.COMET_IO_MERGE_RANGES.key -> "true",
CometConf.COMET_IO_MERGE_RANGES_DELTA.key -> mergeRangeDelta.toString) {
withTempDir { dir =>
val path = new Path(dir.toURI.toString, "part-r-0.parquet")
val expected = makeRawParquetFile(path, 10000)
val schema = StructType(
Seq(StructField("_1", ShortType, true), StructField("_3", LongType, true)))
readParquetFile(path.toString, Some(schema)) { df =>
{
// CometScanExec calls sessionState.newHadoopConfWithOptions which copies
// the sqlConf and some additional options to the hadoopConf and then
// uses the result to create the inputRDD (https://github.com/apache/datafusion-comet/blob/3783faaa01078a35bee93b299368f8c72869198d/spark/src/main/scala/org/apache/spark/sql/comet/CometScanExec.scala#L181).
// We don't have access to the created hadoop Conf, but can confirm that the
// result does contain the correct configuration
assert(
df.sparkSession.sessionState
.newHadoopConfWithOptions(Map.empty)
.get(CometConf.COMET_IO_MERGE_RANGES_DELTA.key)
.equals(mergeRangeDelta.toString))
checkAnswer(
df,
expected.map {
case None =>
Row(null, null)
case Some(i) =>
Row(i.toShort, i.toLong)
})
}
}
}
}
}
}
}
}

def testScanner(cometEnabled: String, scanner: String, v1: Option[String] = None): Unit = {
withSQLConf(
CometConf.COMET_ENABLED.key -> cometEnabled,
Expand Down

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