Skip to content

Update 06-params.md #142

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
merged 1 commit into from
Jul 26, 2019
Merged

Update 06-params.md #142

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
9 changes: 6 additions & 3 deletions _episodes/06-params.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -12,9 +12,12 @@ keypoints:
---
In a previous example, we extracted a file using the "tar" program.
However, that example was very limited because it assumed that the file
we were interested in was called "hello.txt". In this example, you will
see how to reference the value of input parameters dynamically from other
fields.
we were interested in was called "hello.txt", and this was written into the
`.cwl` file. This is not the best way to do this, as the filename may vary or
Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Suggested change
`.cwl` file. This is not the best way to do this, as the filename may vary or
`.cwl` file. This is not the best way to do this, as the "hello.txt" filename may vary or

be dependant on the input file(s) used. To avoid this we can specify the
name of the file we want in the job parameters file (`.yml`). In this example,
you will see how to reference the value of input parameters dynamically
from other fields, which will allow us to then specify the name of the file to extract.

*tar-param.cwl*

Expand Down