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Pull requests: common-workflow-language/cwl-utils

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Pull requests list

Removed cwltool deps
#135 by GlassOfWhiskey was merged Jul 15, 2022 Loading…
17
Add cwl_utils.parser.latest BioHackEU21
#119 by tom-tan was merged Nov 8, 2021 Loading…
16
utility to replace CWL expressions with either ExpressionTools or CommandLineTools
#5 by mr-c was merged Jan 10, 2020 Loading…
40 of 51 tasks
13
Update for subscope and __eq__ support
#167 by tetron was merged Sep 13, 2022 Loading…
11
Provide cwl_utils.parser.load_* and save to provide unified way to load and save the CWL object for all CWL versions
#99 by tom-tan was merged Sep 30, 2021 Loading…
5 tasks done
15
Start adding tests for etools_to_clt
#36 by mr-c was merged Oct 26, 2020 Loading…
11
improve CLI for graph_split.py
#38 by altairwei was merged Nov 5, 2020 Loading…
16
Avoid pulling existing Singularity image #177
#178 by adrabent was merged Nov 28, 2022 Loading…
18
Improve type_for_source function behaviour
#164 by GlassOfWhiskey was merged Sep 27, 2022 Loading…
14
Codegen changes to support cwltool --fast-parse
#156 by tetron was merged Sep 7, 2022 Loading…
3 tasks done
9
docker_extract: support CWL v1.1 and v1.2
#102 by manabuishii was merged May 17, 2023 Loading…
12
Initial "all-in-one" normalizer script
#63 by mr-c was merged Jul 2, 2021 Loading…
1 of 2 tasks
1
7
Regenerate parsers with schema graph property
#145 by GlassOfWhiskey was merged Aug 25, 2022 Loading…
8
Check singularity image already cached
#101 by manabuishii was merged May 17, 2023 Loading…
6
Replace ":" in singularity image name with "_"
#342 by sameeul was merged Dec 10, 2024 Loading…
5
cwl-input-schema implementation
#288 by alexiswl was merged Dec 20, 2024 Loading…
2 tasks done
6
Make load_document_by_path applicable to a URI with http and https schemes
#117 by tom-tan was merged Nov 6, 2021 Loading…
7
expr: better escaping
#47 by mr-c was merged Nov 13, 2020 Loading…
1 task done
1
5
Update schema-salad requirement from <7 to <8 dependencies Pull requests that update a dependency file
#24 by dependabot-preview bot was closed Jul 2, 2020 Loading…
5
Do not require docker save
#247 by jfennick was merged Oct 6, 2023 Loading…
5
Update black requirement from ~=23.7 to ~=23.9 dependencies Pull requests that update a dependency file python Pull requests that update Python code
#245 by dependabot bot was closed Oct 18, 2023 Loading…
4
Moved kill_processes to sandbox destructor
#140 by GlassOfWhiskey was merged Aug 18, 2022 Loading…
5
Failed to run python3 setup.py install in a new docker environment
#107 by suecharo was closed Oct 10, 2021 Loading…
4
Update v1.0 + v1.1 parsers
#15 by illusional was merged May 21, 2020 Loading…
4
Generate parser from cwltool extensions
#337 by GlassOfWhiskey was merged Dec 9, 2024 Loading…
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