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37 followers · 30 following

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@ncw
@JuliaLang
@numfocus
@JuliaPlots

Achievements

Achievement: Pair ExtraordinaireAchievement: QuickdrawAchievement: Public SponsorAchievement: YOLOAchievement: Pull Sharkx3Achievement: Arctic Code Vault ContributorAchievement: Starstruck

Achievements

Achievement: Pair ExtraordinaireAchievement: QuickdrawAchievement: Public SponsorAchievement: YOLOAchievement: Pull Sharkx3Achievement: Arctic Code Vault ContributorAchievement: Starstruck

Highlights

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Organizations

@LocusBio

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  • Mycelia Public

    Multiomic analysis and data integration for biological characterization, prediction, and design. Designed for linux-based HPC and cloud systems.

    Julia 4 3 MIT License Updated Jan 30, 2025

  • BioSequences.jl Public

    Forked from BioJulia/BioSequences.jl

    Biological sequences for the julia language

    Julia MIT License Updated Jan 30, 2025

  • static-demo Public

    Jupyter Notebook Updated Apr 5, 2024

  • Eisenia Public

    Julia Updated Apr 5, 2024

  • GFF3.jl Public

    Forked from BioJulia/GFF3.jl
    Julia MIT License Updated Sep 4, 2023

  • Kmers.jl Public

    Forked from BioJulia/Kmers.jl

    In development: Kmer types and methods for julia

    Julia MIT License Updated Apr 11, 2023

  • pyrodigal Public

    Forked from althonos/pyrodigal

    Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!

    Cython GNU General Public License v3.0 Updated Feb 16, 2023

  • sars-cov2-pangenome-analysis Public archive

    Python Updated Oct 1, 2022

  • uCSV.jl Public

    A Julia package for reading and writing delimited-text; µ in size, ∞ in flexibility

    Julia 8 2 Other Updated Jun 16, 2021

  • LightGraphs.jl Public

    Forked from sbromberger/LightGraphs.jl

    An optimized graphs package for the Julia programming language

    Julia Other Updated Dec 8, 2018

  • singularity-testing Public

    Jupyter Notebook 3 Updated Feb 25, 2017

  • reproducibility-via-singularity Public

    A demo and tutorial for how to use git and singularity to make your research more portable and reproducible

    R 26 1 Updated Oct 13, 2016

  • ExpectationMaximizationExample Public

    Walkthrough of the example shown in Do, C. B., & Batzoglou, S. (2008). What is the expectation maximization algorithm? Nature Biotechnology, 26(8), 897–899. http://doi.org/10.1038/nbt1406

    Jupyter Notebook 1 Updated Apr 11, 2016

  • RBP Public archive

    Jupyter Notebook Updated Dec 18, 2015

  • foobar_solutions Public

    Jupyter notebooks of some google foobar challenge questions

    4 Updated Sep 20, 2015

  • Neurospora_BSA_mutation_mapper Public

    Shell MIT License Updated Sep 10, 2015