Load concentrations in colData(l1).

charles-plessy · Mar 22, 2017 · a52bee2 · a52bee2
1 parent 268204c
commit a52bee2
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/inst/rmarkdown/templates/nanoCAGE/skeleton/skeleton.Rmd b/inst/rmarkdown/templates/nanoCAGE/skeleton/skeleton.Rmd
@@ -233,8 +233,8 @@ read.pg <- function(RUN)
   paste0("../cDNA_yields/", RUN, ".picogreen.xlsx") %>%
     fldgmPicoGreen("PN 100-6160") %>%
     extract(,"concentration")
-libs$Concentration <- c(read.pg(RunA), read.pg(RunB))
-fldgmConcentrationPlot(libs)
+l1$Concentration <- c(read.pg(RunA), read.pg(RunB))
+fldgmConcentrationPlot(colData)l1)
 ```
 
 Combined analysis of fluorescence and cDNA concentration.