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Benchmate_doc_ccm Public
Forked from qin-work/Benchmate_doc_ccmCCM Benchmate documentation
Ruby MIT License UpdatedAug 12, 2025 -
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usearch-molecules Public
Forked from ashvardanian/usearch-moleculesSearching for structural similarities across billions of molecules in milliseconds
Python Apache License 2.0 UpdatedAug 5, 2025 -
minimal-mistakes Public
Forked from mmistakes/minimal-mistakes📐 Jekyll theme for building a personal site, blog, project documentation, or portfolio.
HTML MIT License UpdatedJul 30, 2025 -
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BindCraft Public
Forked from martinpacesa/BindCraftUser friendly and accurate binder design pipeline
Python MIT License UpdatedMay 20, 2025 -
protein_geometry_toolkit Public
Forked from kobehuynh/protein_geometry_toolkitPython UpdatedApr 17, 2025 -
cross_react Public
Allergen cross reactivity analysis using sequence, structure and embeddings
Python UpdatedDec 19, 2024 -
rfdiffusion-pipeline Public
Implementation of the RFdiffusion validation pipeline on the SickKids HPC cluster.
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ccm_python_bootcamp Public
Instructions and material related to 2023 CCM introduction to python bootcamp
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masif_compare Public
implementation of masif pipeline for surface comparison
Python UpdatedJan 9, 2024 -
scPred Public
Forked from powellgenomicslab/scPredscPred package for cell type prediction from scRNA-seq data
R MIT License UpdatedDec 27, 2023 -
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clinpy Public
simple database and methods to combine clinical RNA-Seq data
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pytxdb Public
Package to create and query R's txdb-esque database with some additional features
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d2l-en Public
Forked from d2l-ai/d2l-enInteractive deep learning book with multi-framework code, math, and discussions. Adopted at 300 universities from 55 countries including Stanford, MIT, Harvard, and Cambridge.
Python Other UpdatedMar 1, 2022 -
rBLAST Public
Forked from mhahsler/rBLASTInterface for the Basic Local Alignment Search Tool (BLAST) - R-Package
R GNU General Public License v3.0 UpdatedJan 26, 2022 -
video_parser Public
parse gut slice videos frame by frame into excel with object or movement tracking
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ColabFold Public
Forked from sokrypton/ColabFoldMaking Protein folding accessible to all via Google Colab!
Jupyter Notebook MIT License UpdatedOct 29, 2021 -
alphafold Public
Forked from google-deepmind/alphafoldOpen source code for AlphaFold.
Python Apache License 2.0 UpdatedOct 29, 2021 -
RoseTTAFold Public
Forked from RosettaCommons/RoseTTAFoldThis package contains deep learning models and related scripts for RoseTTAFold
Python MIT License UpdatedOct 26, 2021 -
ParallelFold Public
Forked from Zuricho/ParallelFoldModified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting multiple structures
Python MIT License UpdatedOct 26, 2021 -
statistical_test_lecture Public
These are the lecture materials for CCM's statistical testing lecture
R UpdatedOct 4, 2021