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15 followers · 13 following
  • University of California, Davis
  • Davis, CA

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Achievement: QuickdrawAchievement: Pair Extraordinairex2Achievement: Pull Sharkx2Achievement: YOLO

Achievements

Achievement: QuickdrawAchievement: Pair Extraordinairex2Achievement: Pull Sharkx2Achievement: YOLO

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ccbaumler/README.md

About

Focused on bioinformatically deriving biomedical-relevant answers from public data in the population health field. I find some purpose in helping and mentoring others. Broadly, I aim to eloquently teach topics that are esoteric and under-taught.

Current projects

  1. Discovery and re-discovery of genomic and metabolomic biomarkers in case verse control studies.
  2. Teaching inclusive, equitable, and sustainable practices in scholarly knowledge management

Github Statistics

My latest open-source contributions:

  1. 🚀 Published release v1.0.0 in sourmash-bio/sourmash_plugin_tables
  2. ❗ Opened issue #722 in sourmash-bio/sourmash_plugin_branchwater
  3. ❗ Opened issue #1 in ccbaumler/dissertation
  4. 🗣 Commented on #3850 in sourmash-bio/sourmash
  5. ❗ Opened issue #3850 in sourmash-bio/sourmash
Colton's dynamically generated GitHub stats Colton's dynamically generated GitHub stats

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  1. analyzing-lit analyzing-lit Public

    A quarto presentation on distilling scientific literature with Bibliometric analysis and R tools

    TeX 6

  2. managing-lit managing-lit Public

    A quarto presentation on managing scientific literature with Zotero

    R 5

  3. centralizing-lit centralizing-lit Public

    A presentation on creating a scientific feed aggregator

    HTML 2

  4. CV-template CV-template Public template

    A template to create a Data Driven CV or Resume with R, YAML, LaTeX, and Github Actions

    TeX 1 1

  5. 2025-bioinfo-workshop 2025-bioinfo-workshop Public

    The first iteration of a Bioinformatic and Computational Pedagogy workshop for Highschool STEM instructors.

    HTML

  6. sourmash_plugin_pangenomics sourmash_plugin_pangenomics Public

    Forked from dib-lab/sourmash_plugin_pangenomics

    tools for sourmash-based pangenome analyses

    Python