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Merge pull request #58 from kingaa/master #4
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| name: Render and Deploy Quarto Website | |
| on: | |
| push: | |
| branches: | |
| - master # Set your default branch name | |
| paths: | |
| - '.github/workflows/render-website.yml' | |
| - 'DESCRIPTION' | |
| - 'inst/NEWS' | |
| - 'inst/NEWS.Rd' | |
| - 'R/**' | |
| - 'vignettes/**' | |
| - 'website/**' # Make sure to include the path to your website files | |
| jobs: | |
| checkpkg: | |
| runs-on: ubuntu-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_KEEP_PKG_SOURCE: yes | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: release | |
| use-public-rspm: true | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: any::rcmdcheck | |
| needs: check | |
| - uses: r-lib/actions/check-r-package@v2 | |
| with: | |
| upload-snapshots: true | |
| deploy: | |
| needs: checkpkg | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: write | |
| steps: | |
| - name: Check out repository | |
| uses: actions/checkout@v4 | |
| - name: Set up Quarto | |
| uses: quarto-dev/quarto-actions/setup@v2 | |
| - name: Install R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: release | |
| - name: Install Dependencies | |
| uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: | | |
| any::rcmdcheck | |
| tools | |
| any::desc | |
| any::rmarkdown | |
| any::knitr | |
| kingaa/pomp | |
| any::devtools | |
| any::bib2df | |
| any::tidyverse | |
| any::bookdown | |
| - name: Install package from source | |
| run: | | |
| R CMD INSTALL --preclean --no-multiarch --with-keep.source . | |
| - name: Re-Install to generate HTML files | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| mkdir -p library | |
| Rscript -e "devtools::install(args=c('--preclean','--html','--library=library'))" | |
| rsync --delete -a library/panelPomp/html/ website/html | |
| rsync --delete --exclude=aliases.rds --exclude=paths.rds --exclude=panelPomp.rdb --exclude=panelPomp.rdx --exclude=macros -a library/panelPomp/help/ website/help | |
| R CMD Rdconv -t html inst/NEWS.Rd -o website/NEWS.html | |
| ed -s website/html/00Index.html < website/changes.ed | |
| - name: Copy Vignettes and Other Files | |
| run: | | |
| mkdir -p website/vignettes | |
| cp vignettes/getting-started.Rmd website/vignettes/. | |
| cp vignettes/articles/package_tutorial/tutorial.pdf website/vignettes/. | |
| # cp -r vignettes website/ | |
| Rscript --vanilla website/rmd2qmd.R website/vignettes/getting-started | |
| rm website/vignettes/getting-started.Rmd | |
| tree website | |
| - name: Render and Publish | |
| uses: quarto-dev/quarto-actions/publish@v2 | |
| with: | |
| target: gh-pages | |
| path: website | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |