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Pull requests: cancerit/PCAP-core

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Pull requests list

Do Not Merge!: Update CHANGES and bump version
#37 by ghost was merged Mar 7, 2019 • Draft
2
Add qc_fail reads to counts and stats
#11 by keiranmraine was merged Jan 22, 2018 Loading…
1
Feature/Add Dockerfile and improve README and INSTALL docs
#13 by jsmedmar was closed Feb 20, 2018 Loading…
1
Feature/mismatch qc c
#15 by keiranmraine was merged Feb 20, 2018 Loading…
1
DO NOT MERGE - Hotfix/4.1.4
#17 by ghost was closed Mar 12, 2018 Loading…
3
Feature/add threadpool
#20 by ghost was merged Mar 15, 2018 Loading…
5
WIP: Makes bas output more logically comparable to pre 4.1.x release outputs
#27 by keiranmraine was closed Oct 30, 2018 Loading…
2
DO NOT MERGE!! Hotfix/4.2.5
#28 by ghost was closed Jan 22, 2019 Loading…
2
Hotfix/4.2.7
#32 by keiranmraine was closed Feb 21, 2019 Loading…
Hotfix/4.2.7
#33 by keiranmraine was closed Feb 21, 2019 • Draft
1
Hotfix/4.2.7
#34 by keiranmraine was closed Feb 21, 2019 • Draft
Hotfix/4.2.7
#35 by keiranmraine was closed Mar 7, 2019 • Draft
2
Feature/clean legacy
#1 by keiranmraine was merged Feb 17, 2017 Loading…
@AndyMenzies
Feature/mm flag modifier
#36 by ghost was merged Mar 7, 2019 Loading…
8
Hotfix/4.3.1
#38 by ghost was closed Mar 22, 2019 Loading…
3
Update Ubuntu 16 install
#43 by mflevine was merged Apr 16, 2019 Loading…
1
Feature/dockerise
#49 by keiranmraine was merged Oct 4, 2019 Loading…
1
Changes required to provide a merging script which is aware of mmQc
#50 by keiranmraine was closed Feb 10, 2020 Loading…
7
Feature/bwamem2
#54 by keiranmraine was merged Feb 14, 2020 Loading…
14
WIP: DO NOT MERGE - Hotfix/5.0.4
#55 by davidrajones was closed Apr 7, 2020 Loading…
9
Support for Illumina-style paired FASTQ names and related tests
#56 by ckandoth was merged Aug 19, 2020 Loading…
3
WIP DO NOT MERGE - Hotfix/5.0.5
#57 by davidrajones was closed May 1, 2020 • Draft
6
Feature/full read collate
#58 by keiranmraine was merged Jun 19, 2020 Loading…
3
Expose fastcollate option
#59 by keiranmraine was merged Jun 27, 2020 Loading…
Hotfix/1.7.1
#72 by ThomasSClarke was closed Aug 9, 2024 • Draft
ProTip! What’s not been updated in a month: updated:<2024-12-27.