Update tests to reflect change in genotype outputs

cancerit · Aug 12, 2022 · 173add3 · 173add3
1 parent d9a53ea
commit 173add3
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Showing 2 changed files with 1 addition and 76 deletions.
diff --git a/.circleci/config.yml b/.circleci/config.yml
diff --git a/tests/output_tests.c b/tests/output_tests.c
@@ -253,7 +253,7 @@ int test_output_to_file_int(){
 
 	gzclose(out);
 
-	char *exp = "Y\t10\t.\tC\tT\t.\t.\tDP=136;MP=9.4e-01;GP=7.7e-02;TG=CC/TT;TP=9.5e-01;SG=CC/CC;SP=4.8e-02\tGT:FAZ:FCZ:FGZ:FTZ:RAZ:RCZ:RGZ:RTZ:PM\t0|0:1:2:3:4:5:6:7:8:3.3e-01\t1|1:9:10:11:12:13:14:15:16:2.8e-01\n";
+	char *exp = "Y\t10\t.\tC\tT\t.\t.\tDP=136;MP=9.4e-01;GP=7.7e-02;TG=CC/TT;TP=9.5e-01;SG=CC/CC;SP=4.8e-02\tGT:FAZ:FCZ:FGZ:FTZ:RAZ:RCZ:RGZ:RTZ:PM\t0/0:1:2:3:4:5:6:7:8:3.3e-01\t1/1:9:10:11:12:13:14:15:16:2.8e-01\n";
 	out = gzopen(out_test_vcf,"rb");
 	char line[5000];
 	int count = 0;