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yet another datagram

Set of tools to process raw instrument data according to a schema into a standardised form called datagram, annotated with metadata, provenance information, timestamps, units, and uncertainties. Developed by the Materials for Energy Conversion at Empa - Materials Science and Technology.

schema to datagram with yadg

Capabilities:

  • Parsing tabulated data using CSV parsing functionality, including Bronkhorst and DryCal output formats. Columns can be post-processed using any linear combinations of raw and processed data using the calibration functionality.
  • Parsing chromatography data from gas and liquid chromatography, including several Agilent, Masshunter, and Fusion formats. If a calibration file is provided, the traces are automatically integrated using built-in integration routines.
  • Parsing reflection coefficient traces from network analysers. The raw data can be fitted to obtain the quality factor and central frequency using several algorithms.
  • Parsing potentiostat files for electrochemistry applications. Supports BioLogic file formats.

Features:

  • timezone-aware timestamping using Unix timestamps
  • automatic uncertainty determination using data contained in the raw files, instrument specification, or last significant digit
  • uncertainty propagation to derived quantities
  • tagging of data with units
  • extensive schema and datagram validation using provided specifications
  • mandatory metadata (such as provenance) is enforced

The full list of capabilities and features is listed in the project documentation.

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  • Python 57.0%
  • Rich Text Format 39.6%
  • TeX 3.4%