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This pull request has the project switch to using ruff instead of pyflakes and handles the slight differences it has.
I was considering moving this into another pull request to follow this one, but I also switched to using ruff's integrated version of isort as well.
They have a quite compelling advertisement of sorts of why you should use their system in their readme, but in the end I am suggesting to switch to ruff because it's got nearly all the warnings flake8 does but also has autofix support, and it's way faster.
astral-sh/ruff#970 is tracking pyflakes re-implementation progress, and using ruff opens the door to enabling even more checks in the future with almost no performance loss for doing so.