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buswinka/README.md

I'm Chris @buswinka, a PhD Candidate at Harvard Medical School, Mass Eye and Ear interested in inner ear biology and deep learning, specifically the application of novel 3D instance segmentation algorithms to explore mitochondria morphology from focused ion beam scanning electron microscopy (FIB-SEM) micrographs of sensory hair cells.

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  1. skoots skoots Public

    SKeleton Oriented ObjecT Segmentation (SKOOTS) - instance segmentation of large, densely packed objects in biomedical images

    Python 3 1

  2. indzhykulianlab/hcat indzhykulianlab/hcat Public

    A Hair Cell Analysis Toolbox - A collection of analysis software for automating some common cochlear image analysis

    Python 5 1

  3. bism bism Public

    Biomedical Image Segmentation Models

    Python 1 1

  4. hcat-data hcat-data Public

    Tools and Data behind the Hair Cell Analysis Toolbox (HCAT)

    Python 1