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25 Open 24 Closed
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Issues list

Loop plot(Peak-gene link)
#49 opened Nov 14, 2024 by tinyimp80
1
stuck on "runGenePeakcorr"
#46 opened Jul 3, 2024 by ytrink
2
runGenePeakcorr Memory Issues
#44 opened Jun 11, 2024 by micahtratt
2
Bulk ATAC and RNAseq data
#43 opened Apr 2, 2024 by lucalvizi
1
Genome Build Supported
#42 opened Mar 1, 2024 by sylestiel
problem with pairCells function with a large data
#41 opened Feb 15, 2024 by revolvefire
Error installing FigR
#40 opened Dec 14, 2023 by acaulier
1
Error when running runGenePeakcorr
#39 opened Dec 13, 2023 by klgoss
4
Extracting Dataset specific information from merged analysis
#35 opened Oct 23, 2023 by sylestiel
1
How to get cisBP_mouse_pfms_2021.rds in runFigRGRN function?
#34 opened Aug 9, 2023 by Rivers-Lee
1
Extraction of a matrix object of cisTopic probability scores
#33 opened Jul 6, 2023 by Dalhte
Error in pairCells function
#30 opened May 15, 2023 by LalicJ
4
Determine pairs through optimized bipartite matching ..
#29 opened Apr 10, 2023 by OMIC-coding
16
how to solve the problem that memeory usage is too large
#28 opened Apr 7, 2023 by chenc327
Should dimensionality reduction be repeated for each subset of a dataset?
#27 opened Mar 30, 2023 by compbiologist
3
Removing Rik genes from figR.d listing
#24 opened Feb 9, 2023 by sylestiel
10
Does the RNAmatrix need to be scaled?
#23 opened Feb 9, 2023 by sylestiel
runGenePeakcorr error: unable to find an inherited method for function ‘letterFrequency’ for signature ‘"DNAStringSetList"’
#22 opened Feb 9, 2023 by fh34
3
Error in runGenePeakcorr
#21 opened Feb 2, 2023 by Genki-YAN
2
Altering the aesthetics of plotfigRNetwork()
#20 opened Jan 30, 2023 by sylestiel
6
Run with cattle data
#17 opened Jan 11, 2023 by liyang24
runGenePeakcorr error: the condition has length > 1
#16 opened Dec 1, 2022 by lizakulaeva
3
runGenePeakcorr - Requesting ability to specify updated genomes (such as mm39)
#9 opened Oct 31, 2022 by iilyashov
4
runGenePeakcorr,Using the genomes of other species
#8 opened Oct 21, 2022 by liyang24
4
long vectors not supported for PairCells
#4 opened Aug 5, 2022 by sallyqus
4
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