handle sex aneuploidy in pipeline #945
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jklugherz
commented
Oct 30, 2024
| R0116_sex_check_project2 family_2 family_2 ROS_007_19Y05939_D1 F | ||
| R0116_sex_check_project2 family_2 family_2 ROS_007_19Y05987_D1 ROS_007_19Y05919_D1 ROS_007_19Y05939_D1 F | ||
| R0116_sex_check_project2 family_2 family_2 ROS_007_19Y05987_D1 ROS_007_19Y05919_D1 ROS_007_19Y05939_D1 F | ||
| R0116_sex_check_project2 family_2 family_2 ROS_007_19Y05989_D1 ROS_007_19Y05919_D1 ROS_007_19Y05939_D1 XXX |
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need to confirm that pedigree file will also be delivered with sex aneupolodies matching those in the imputed sex file predicted_sex
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confirmed! This is how seqr would generate a pedigree file with an aneuploidy
jklugherz
commented
Oct 30, 2024
| This folder comprises a Hail (www.hail.is) native Table or MatrixTable. | ||
| Written with version 0.2.128-eead8100a1c1 | ||
| Created at 2024/05/02 16:11:09 | ||
| Written with version 0.2.132-678e1f52b999 |
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added 4 new samples with the 4 new sexes
bpblanken
approved these changes
Oct 31, 2024
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