Vs 1416 modify ingest to correctly handle ploidy differences in dragen 3 7 8 samples #4811

Job	Run time
Validate generated WDLs using womtools	13m 24s
build and push gatk docker to artifacts	44m 52s
check if the environment has privileges	1s
Validate script WDLs using womtools	58s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell	50m 33s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell	51m 26s
WDL test RUN_CNV_SOMATIC_WDL on cromwell	51m 58s
WDL test RUN_M2_WDL on cromwell	52m 58s
WDL test RUN_CNN_WDL on cromwell	42m 30s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell	39m 33s
Java 17.0.6+10 build and test cloud	26m 15s
Java 17.0.6+10 build and test integration	34m 10s
Java 17.0.6+10 build and test unit	20m 30s
Java 17.0.6+10 test on docker integration	38m 23s
Java 17.0.6+10 test on docker unit	23m 16s
Java 17.0.6+10 test on docker variantcalling	33m 56s
Java 17.0.6+10 test on docker conda	29m 43s
	9h 14m 26s

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