[WX-1615] Stop converting metadata values to strings before inserting them into the database

services/src/main/scala/cromwell/services/metadata/impl/WriteMetadataActor.scala

@@ -6,7 +6,7 @@ import cromwell.core.Dispatcher.ServiceDispatcher
 import cromwell.core.Mailbox.PriorityMailbox
 import cromwell.core.WorkflowId
 import cromwell.core.instrumentation.InstrumentationPrefixes
-import cromwell.services.metadata.{MetadataEvent, MetadataValue}
+import cromwell.services.metadata.{MetadataEvent, MetadataString, MetadataValue}
 import cromwell.services.metadata.MetadataService._
 import cromwell.services.metadata.impl.MetadataStatisticsRecorder.MetadataStatisticsRecorderSettings
 import cromwell.services.{EnhancedBatchActor, MetadataServicesStore}
@@ -65,7 +65,12 @@ class WriteMetadataActor(override val batchSize: Int,
       val metadataEvents =
         metadataWriteAction.events.map { event =>
           event.value match {
-            case Some(eventVal) => event.copy(value = Option(MetadataValue(StringUtil.cleanUtf8mb4(eventVal.value))))
+            case Some(eventVal) =>
+              if (eventVal.valueType == MetadataString && metadataKeysToClean.contains(event.key.key)) {
+                event.copy(value = Option(MetadataValue(StringUtil.cleanUtf8mb4(eventVal.value))))
+              } else {
+                event
+              }
             case None => event
           }
         }

services/src/test/scala/cromwell/services/metadata/impl/WriteMetadataActorSpec.scala

@@ -1,7 +1,6 @@
 package cromwell.services.metadata.impl
 
 import java.sql.{Connection, Timestamp}
-
 import akka.actor.ActorRef
 import akka.testkit.{TestFSMRef, TestProbe}
 import cats.data.NonEmptyVector
@@ -19,7 +18,7 @@ import cromwell.services.metadata.MetadataService.{
 }
 import cromwell.services.metadata.impl.MetadataStatisticsRecorder.MetadataStatisticsDisabled
 import cromwell.services.metadata.impl.WriteMetadataActorSpec.BatchSizeCountingWriteMetadataActor
-import cromwell.services.metadata.{MetadataEvent, MetadataKey, MetadataValue}
+import cromwell.services.metadata.{MetadataEvent, MetadataInt, MetadataKey, MetadataValue}
 import org.scalatest.concurrent.Eventually
 import org.scalatest.flatspec.AnyFlatSpecLike
 import org.scalatest.matchers.should.Matchers
@@ -178,7 +177,7 @@ class WriteMetadataActorSpec extends TestKitSuite with AnyFlatSpecLike with Matc
 
     sanitizedWriteActions.map { writeAction =>
       writeAction.events.map { event =>
-        if (event.value.getOrElse(fail("Removed value from metadata event")).value.matches("[\\x{10000}-\\x{FFFFF}]")) {
+        if (event.value.getOrElse(fail("Removed value from metadata event")).value.contains("\uD83C\uDF89")) {
           fail("Metadata event contains emoji")
         }
 
@@ -220,7 +219,7 @@ class WriteMetadataActorSpec extends TestKitSuite with AnyFlatSpecLike with Matc
 
     sanitizedWriteActions.map { writeAction =>
       writeAction.events.map { event =>
-        if (event.value.getOrElse(fail("Removed value from metadata event")).value.matches("[\\x{10000}-\\x{FFFFF}]")) {
+        if (event.value.getOrElse(fail("Removed value from metadata event")).value.contains("\uD83C\uDF89")) {
           fail("Metadata event contains emoji")
         }
 
@@ -231,6 +230,90 @@ class WriteMetadataActorSpec extends TestKitSuite with AnyFlatSpecLike with Matc
     }
   }
 
+  it should s"test sanitize inputs does not modify metadata values whose keys are not included in the keys to clean" in {
+    val registry = TestProbe().ref
+    val writeActor =
+      TestFSMRef(new BatchSizeCountingWriteMetadataActor(10, 10.millis, registry, Int.MaxValue, List("some_key")) {
+        override val metadataDatabaseInterface = mockDatabaseInterface(100)
+      })
+
+    def metadataEvent(index: Int, probe: ActorRef) = PutMetadataActionAndRespond(
+      List(
+        MetadataEvent(MetadataKey(WorkflowId.randomId(), None, "metadata_key"), MetadataValue(s"🎉_$index"))
+      ),
+      probe
+    )
+
+    val probes = (0 until 43)
+      .map { _ =>
+        val probe = TestProbe()
+        probe
+      }
+      .zipWithIndex
+      .map { case (probe, index) =>
+        probe -> metadataEvent(index, probe.ref)
+      }
+
+    val metadataWriteActions = probes.map(probe => probe._2).toVector
+    val metadataWriteActionNE = NonEmptyVector(metadataWriteActions.head, metadataWriteActions.tail)
+
+    val sanitizedWriteActions = writeActor.underlyingActor.sanitizeInputs(metadataWriteActionNE)
+
+    sanitizedWriteActions.map { writeAction =>
+      writeAction.events.map { event =>
+        if (!event.value.getOrElse(fail("Removed value from metadata event")).value.contains("\uD83C\uDF89")) {
+          fail("Metadata event was incorrectly sanitized")
+        }
+
+        if (event.value.getOrElse(fail("Removed value from metadata event")).value.contains("\uFFFD")) {
+          fail("Incorrectly replaced character in metadata event")
+        }
+      }
+    }
+  }
+
+  it should s"test sanitize inputs does not modify metadata values that are not strings" in {
+    val registry = TestProbe().ref
+    val writeActor =
+      TestFSMRef(new BatchSizeCountingWriteMetadataActor(10, 10.millis, registry, Int.MaxValue, List("metadata_key")) {
+        override val metadataDatabaseInterface = mockDatabaseInterface(100)
+      })
+
+    def metadataEvent(index: Int, probe: ActorRef) = PutMetadataActionAndRespond(
+      List(
+        MetadataEvent(MetadataKey(WorkflowId.randomId(), None, "metadata_key"), MetadataValue(100))
+      ),
+      probe
+    )
+
+    val probes = (0 until 43)
+      .map { _ =>
+        val probe = TestProbe()
+        probe
+      }
+      .zipWithIndex
+      .map { case (probe, index) =>
+        probe -> metadataEvent(index, probe.ref)
+      }
+
+    val metadataWriteActions = probes.map(probe => probe._2).toVector
+    val metadataWriteActionNE = NonEmptyVector(metadataWriteActions.head, metadataWriteActions.tail)
+
+    val sanitizedWriteActions = writeActor.underlyingActor.sanitizeInputs(metadataWriteActionNE)
+
+    sanitizedWriteActions.map { writeAction =>
+      writeAction.events.map { event =>
+        if (!(event.value.getOrElse(fail("Removed value from metadata event")).valueType == MetadataInt)) {
+          fail("Changed metadata type")
+        }
+
+        if (!event.value.getOrElse(fail("Removed value from metadata event")).value.equals("100")) {
+          fail("Modified metadata value")
+        }
+      }
+    }
+  }
+
   // Mock database interface.
   // A customizable number of failures occur between each success
   def mockDatabaseInterface(failuresBetweenEachSuccess: Int) = new MetadataSqlDatabase with SqlDatabase {