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Merge pull request #164 from bmeg/graphql-fix
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make graphql schema build more robust
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@adamstruck
adamstruck authored Nov 21, 2018
2 parents 2cd80f1 + b2062dc commit 81397ec
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13 changes: 12 additions & 1 deletion docs/docs/index.xml
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<atom:link href="https://docs.bmeg.io/grip/docs/index.xml" rel="self" type="application/rss+xml" />


<item>
<title></title>
<link>https://docs.bmeg.io/grip/docs/tutorials/pathway-commons/</link>
<pubDate>Mon, 01 Jan 0001 00:00:00 +0000</pubDate>

<guid>https://docs.bmeg.io/grip/docs/tutorials/pathway-commons/</guid>
<description>Get Pathway Commons release
curl -O http://www.pathwaycommons.org/archives/PC2/v10/PathwayCommons10.All.BIOPAX.owl.gz Convert to Property Graph
grip rdf --dump --gzip pc PathwayCommons10.All.BIOPAX.owl.gz -m http://pathwaycommons.org/pc2/#=pc: -m http://www.biopax.org/release/biopax-level3.owl#=biopax: </description>
</item>

<item>
<title>Amazon Purchase Network</title>
<link>https://docs.bmeg.io/grip/docs/tutorials/amazon/</link>
Expand Down Expand Up @@ -92,7 +103,7 @@ Load built-in example graph Loading the example data and the example schema:
grip load example-graph See the example graph
grip dump example-graph --vertex --edge See the example graph schema
grip schema example-graph Example queries Get Types:
curl -X POST -H &amp;quot;Content-Type:application/graphql&amp;quot; -d &#39;{__schema{types{name}}}&#39; http://localhost:8201/graphql/example Get Info about Human object</description>
curl -X POST -H &amp;quot;Content-Type:application/graphql&amp;quot; -d &#39;{__schema{types{name}}}&#39; http://localhost:8201/graphql/example-graph Get Info about Human object</description>
</item>

<item>
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8 changes: 4 additions & 4 deletions docs/docs/queries/graphql/index.html
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Expand Up @@ -249,22 +249,22 @@ <h3 id="example-queries">Example queries</h3>

<p>Get Types:</p>

<pre><code>curl -X POST -H &quot;Content-Type:application/graphql&quot; -d '{__schema{types{name}}}' http://localhost:8201/graphql/example
<pre><code>curl -X POST -H &quot;Content-Type:application/graphql&quot; -d '{__schema{types{name}}}' http://localhost:8201/graphql/example-graph
</code></pre>

<p>Get Info about Human object</p>

<pre><code>curl -X POST -H &quot;Content-Type:application/graphql&quot; -d '{__type(name:&quot;Human&quot;){fields{name}}}' http://localhost:8201/graphql/example
<pre><code>curl -X POST -H &quot;Content-Type:application/graphql&quot; -d '{__type(name:&quot;Human&quot;){fields{name}}}' http://localhost:8201/graphql/example-graph
</code></pre>

<p>Get List of all Human ids</p>

<pre><code>curl -X POST -H &quot;Content-Type:application/graphql&quot; -d 'query { HumanIds }' http://localhost:8201/graphql/example
<pre><code>curl -X POST -H &quot;Content-Type:application/graphql&quot; -d 'query {Human{id}}' http://localhost:8201/graphql/example-graph
</code></pre>

<p>Get Human 1000 and list their friends</p>

<pre><code>curl -X POST -H &quot;Content-Type:application/graphql&quot; -d 'query {Human(id:&quot;1000&quot;){name,friends{name}}}' http://localhost:8201/graphql/example
<pre><code>curl -X POST -H &quot;Content-Type:application/graphql&quot; -d 'query {Human(id:&quot;1000&quot;){name,friend_to_Human{name}}}' http://localhost:8201/graphql/example-graph
</code></pre>

</div>
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237 changes: 237 additions & 0 deletions docs/docs/tutorials/pathway-commons/index.html
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<!DOCTYPE html>
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en-us" lang="en-us">
<head>
<link href="http://gmpg.org/xfn/11" rel="profile">
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<span class="intermediate">Query a Graph</span></li>

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<a href="https://docs.bmeg.io/grip/docs/queries/getting_started/"
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<a href="https://docs.bmeg.io/grip/docs/queries/jsonpath/"
class="sidebar-nav-item "
>Referencing Fields</a></li>
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<a href="https://docs.bmeg.io/grip/docs/queries/graphql/"
class="sidebar-nav-item "
>GraphQL</a></li>
</ul>
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<span class="intermediate">Tutorials</span></li>

<li>
<ul class="sidebar-nav sidebar-nav-nested">
<li>
<a href="https://docs.bmeg.io/grip/docs/tutorials/amazon/"
class="sidebar-nav-item "
>Amazon Purchase Network</a></li>
</ul>
</li>

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<a href="https://docs.bmeg.io/grip/docs/tutorials/tcga-rna/"
class="sidebar-nav-item "
>TCGA RNA Expression</a></li>
</ul>
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class="sidebar-nav-item "
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<a href="https://github.com/bmeg/grip/blob/master/gripql/gripql.proto"
class="sidebar-nav-item "
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</div>

<div class="main col span_8_of_12">
<p>Get Pathway Commons release</p>

<pre><code>curl -O http://www.pathwaycommons.org/archives/PC2/v10/PathwayCommons10.All.BIOPAX.owl.gz
</code></pre>

<p>Convert to Property Graph</p>

<pre><code>grip rdf --dump --gzip pc PathwayCommons10.All.BIOPAX.owl.gz -m http://pathwaycommons.org/pc2/#=pc: -m http://www.biopax.org/release/biopax-level3.owl#=biopax:
</code></pre>

</div>

</div>
</body>
</html>
2 changes: 1 addition & 1 deletion docs/index.html
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<!DOCTYPE html>
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en-us" lang="en-us">
<head>
<meta name="generator" content="Hugo 0.47.1" />
<meta name="generator" content="Hugo 0.51" />
<link href="http://gmpg.org/xfn/11" rel="profile">
<meta http-equiv="content-type" content="text/html; charset=utf-8">

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13 changes: 12 additions & 1 deletion docs/index.xml
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<atom:link href="https://docs.bmeg.io/grip/index.xml" rel="self" type="application/rss+xml" />


<item>
<title></title>
<link>https://docs.bmeg.io/grip/docs/tutorials/pathway-commons/</link>
<pubDate>Mon, 01 Jan 0001 00:00:00 +0000</pubDate>

<guid>https://docs.bmeg.io/grip/docs/tutorials/pathway-commons/</guid>
<description>Get Pathway Commons release
curl -O http://www.pathwaycommons.org/archives/PC2/v10/PathwayCommons10.All.BIOPAX.owl.gz Convert to Property Graph
grip rdf --dump --gzip pc PathwayCommons10.All.BIOPAX.owl.gz -m http://pathwaycommons.org/pc2/#=pc: -m http://www.biopax.org/release/biopax-level3.owl#=biopax: </description>
</item>

<item>
<title>Amazon Purchase Network</title>
<link>https://docs.bmeg.io/grip/docs/tutorials/amazon/</link>
Expand Down Expand Up @@ -102,7 +113,7 @@ Load built-in example graph Loading the example data and the example schema:
grip load example-graph See the example graph
grip dump example-graph --vertex --edge See the example graph schema
grip schema example-graph Example queries Get Types:
curl -X POST -H &amp;quot;Content-Type:application/graphql&amp;quot; -d &#39;{__schema{types{name}}}&#39; http://localhost:8201/graphql/example Get Info about Human object</description>
curl -X POST -H &amp;quot;Content-Type:application/graphql&amp;quot; -d &#39;{__schema{types{name}}}&#39; http://localhost:8201/graphql/example-graph Get Info about Human object</description>
</item>

<item>
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4 changes: 4 additions & 0 deletions docs/sitemap.xml
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<urlset xmlns="http://www.sitemaps.org/schemas/sitemap/0.9"
xmlns:xhtml="http://www.w3.org/1999/xhtml">

<url>
<loc>https://docs.bmeg.io/grip/docs/tutorials/pathway-commons/</loc>
</url>

<url>
<loc>https://docs.bmeg.io/grip/docs/tutorials/amazon/</loc>
</url>
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