Add disease context qualifier and make it available only to phenotype associations (initially, at least) #159
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--- | |
name: Check Dependencies in Pyproject.toml | |
# Controls when the action will run. | |
on: | |
pull_request: | |
types: [opened, synchronize, reopened] | |
workflow_dispatch: # Allows you to run this workflow manually from the Actions tab | |
types: trigger-run-check-dependencies | |
# A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
jobs: | |
# This workflow contains a single job called "build" | |
build: | |
# The type of runner that the job will run on | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
python: [ "3.9", "3.10" ] | |
# Steps represent a sequence of tasks that will be executed as part of the job | |
steps: | |
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
- uses: actions/checkout@v2 | |
- uses: actions/setup-python@v2 | |
name: setup python environment | |
with: | |
python-version: ${{ matrix.python }} | |
# this step we remove and rebuild the poetry.lock file to ensure that the tests that follow can be run | |
# with the latest dependencies | |
- name: Install dependencies | |
run: | | |
pip install --upgrade pip | |
pip install poetry | |
rm -rf poetry.lock | |
poetry install | |
- name: Run tests | |
run: | | |
make test |