Implemented LCS #1
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… --freeendgap. Implemented other tests
Progetto Bioinformatica
… with a more approriate one (gaps_ends_a -> gaps_only_at_ends_in_a)
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As requested in classroom I modified seq-align adding the capability to compute LCS.
This is done by addition of a new scoring system.
I also implemented a support function to print the LCS between two sequences.