simplify custom base ontology; use latest (patched) BioCypher version

config/ontologies/custom.ttl

@@ -1,53 +1,9 @@
-@prefix dc: <http://purl.org/dc/elements/1.1/> .
-@prefix grddl: <http://www.w3.org/2003/g/data-view#> .
 @prefix owl: <http://www.w3.org/2002/07/owl#> .
-@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
 @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
-@prefix xml: <http://www.w3.org/XML/1998/namespace> .
-@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
-
-<http://www.w3.org/2002/07/owl> a owl:Ontology ;
-     dc:title "The OWL 2 Schema vocabulary (OWL 2)" ;
-     rdfs:comment """
-  This ontology partially describes the built-in classes and
-  properties that together form the basis of the RDF/XML syntax of OWL 2.
-  The content of this ontology is based on Tables 6.1 and 6.2
-  in Section 6.4 of the OWL 2 RDF-Based Semantics specification,
-  available at http://www.w3.org/TR/owl2-rdf-based-semantics/.
-  Please note that those tables do not include the different annotations
-  (labels, comments and rdfs:isDefinedBy links) used in this file.
-  Also note that the descriptions provided in this ontology do not
-  provide a complete and correct formal description of either the syntax
-  or the semantics of the introduced terms (please see the OWL 2
-  recommendations for the complete and normative specifications).
-  Furthermore, the information provided by this ontology may be
-  misleading if not used with care. This ontology SHOULD NOT be imported
-  into OWL ontologies. Importing this file into an OWL 2 DL ontology
-  will cause it to become an OWL 2 Full ontology and may have other,
-  unexpected, consequences.
-   """ ;
-     rdfs:isDefinedBy
-          <http://www.w3.org/TR/owl2-mapping-to-rdf/>,
-          <http://www.w3.org/TR/owl2-rdf-based-semantics/>,
-          <http://www.w3.org/TR/owl2-syntax/> ;
-     rdfs:seeAlso   <http://www.w3.org/TR/owl2-rdf-based-semantics/#table-axiomatic-classes>,
-                    <http://www.w3.org/TR/owl2-rdf-based-semantics/#table-axiomatic-properties> ;
-     owl:imports <http://www.w3.org/2000/01/rdf-schema> ;
-     owl:versionIRI <http://www.w3.org/2002/07/owl> ;
-     owl:versionInfo "$Date: 2009/11/15 10:54:12 $" ;
-     grddl:namespaceTransformation <http://dev.w3.org/cvsweb/2009/owl-grddl/owx2rdf.xsl> . 
-
-
-owl:Class a rdfs:Class ;
-     rdfs:label "Class" ;
-     rdfs:comment "The class of OWL classes." ;
-     rdfs:isDefinedBy <http://www.w3.org/2002/07/owl#> ;
-     rdfs:subClassOf rdfs:Class .
 
 owl:Ontology a owl:Class ;
      rdfs:label "Ontology" ;
-     rdfs:comment "The class of OWL individuals." ;
-     rdfs:isDefinedBy <http://www.w3.org/2002/07/owl#> .
+     rdfs:comment "The root class." .
 
 owl:ICD a owl:Class ;
      rdfs:label "ICD" ;