Phame

recipes/phame/meta.yaml

@@ -1,6 +1,6 @@
 {% set name = "phame" %}
-{% set version = "1.0.1" %}
-{% set hash = "ea14d2dfe6c88a2906fed37bdccd4cdab5f62b19fdfc7639d1b40bac32c6b4f6" %}
+{% set version = "1.0.2" %}
+{% set hash = "79292f8a00290f3e85e1df8c1edbd000c1548f1b3c176c2a4949d78a1aabe973" %}
 
 package:
   name: {{ name }}
@@ -17,14 +17,14 @@ build:
 requirements:
   run:
     - perl
+    - perl-statistics-distributions >=1.02
     - perl-getopt-long >=2.50
     - perl-file-path >=2.12
     - perl-io-handle >=1.35
     - perl-parallel-forkmanager >=1.17
-    - perl-statistics-distributions >=1.02
     - perl-app-cpanminus >=1.7039
     - perl-io-handle >=1.28
-    - perl-bioperl >=1.6.924
+    - perl-bioperl >=1.7.2
     - cmake >=3.0.1
     - bwa >=0.7.12
     - samtools >=1.7
@@ -45,21 +45,13 @@ test:
   commands:
     - perl --version
     - which perl
-    - which runPhaME
-    - runPhaME -h
-    - which bwa
-    - which bcftools
-    - which samtools
-    - which bcftools
-    - which mummer
-    - which FastTree
-    - which bowtie2
-    - which muscle
+    - phame -h
+    - phame --vcheck
 
 
 about:
   home: https://github.com/LANL-Bioinformatics/PhaME
-  license: GPL2
+  license: BSD-3
   summary: A tool to derive SNP matrices and phylogenetic tree from raw reads, contigs, and full genomes.
 
 extra: